BLASTX nr result

ID: Scutellaria23_contig00030656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030656
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298539.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   148   5e-34
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              148   5e-34
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   140   8e-32
dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]      137   1e-30

>ref|XP_002298539.1| predicted protein [Populus trichocarpa] gi|222845797|gb|EEE83344.1|
           predicted protein [Populus trichocarpa]
          Length = 490

 Score =  152 bits (385), Expect = 2e-35
 Identities = 78/154 (50%), Positives = 103/154 (66%), Gaps = 4/154 (2%)
 Frame = -2

Query: 452 MNSSVAQADESMGIIHALNLGXXXXXXXXXXXVGHMQISSLHVVIPDNLLLFMSPLSLSG 273
           +NSSVA+ D   G   AL+LG            GHMQ+SSL+VV+PD L LF+ PL +SG
Sbjct: 281 LNSSVAEVDHLSGFAQALSLGVTSVIVKDTRVAGHMQVSSLNVVLPDTLCLFIMPLPVSG 340

Query: 272 DQIEGFEPIPSISRWYVVAGRLYLIHIKVFSPGPGAQEIFVTESDEIELHDNQDEIWSIL 93
           D ++G + IPS++RW+VV+GR Y+I +KVF  GP AQEI++TESD+++LH  Q E W+I 
Sbjct: 341 DPVDGLKAIPSLARWFVVSGRQYIIQMKVFLGGPDAQEIYITESDDLKLHHEQSEYWTIF 400

Query: 92  PVSEGTKK----RNQRILDASSYGLGKLTATLAY 3
            +SE        RN RIL A S G GKLTA+L Y
Sbjct: 401 MLSEDIVVKHGWRNSRILRAISLGQGKLTASLTY 434


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/154 (49%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
 Frame = -2

Query: 452 MNSSVAQADESMGIIHALNLGXXXXXXXXXXXVGHMQISSLHVVIPDNLLLFMSPLSLSG 273
           +NSSVAQ D  MG+++ L+LG            GH+Q+SSLHVV+PD L L++ PLSLS 
Sbjct: 367 LNSSVAQVDSQMGLVNVLSLGVTTVTVEDTRVAGHIQMSSLHVVLPDTLCLYILPLSLSD 426

Query: 272 DQIEGFEPIPSISRWYVVAGRLYLIHIKVFSPGPGAQEIFVTESDEIELHDNQDEIWSIL 93
           D +EG + IPS +RWY  +G+ YLI +KVFS GPG QE+++TESDE+ L  NQ   W   
Sbjct: 427 DPLEGAKSIPSGARWYAFSGQQYLIQMKVFSGGPGGQEVYITESDEVSLQYNQSIYWKAF 486

Query: 92  PVSEGTKKR----NQRILDASSYGLGKLTATLAY 3
            VS+    +    N RIL  +S GLG LTA+L+Y
Sbjct: 487 LVSDRIAVKHDWWNSRILKMTSEGLGNLTASLSY 520


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/154 (49%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
 Frame = -2

Query: 452 MNSSVAQADESMGIIHALNLGXXXXXXXXXXXVGHMQISSLHVVIPDNLLLFMSPLSLSG 273
           +NSSVAQ D  MG+++ L+LG            GH+Q+SSLHVV+PD L L++ PLSLS 
Sbjct: 292 LNSSVAQVDSQMGLVNVLSLGVTTVTVEDTRVAGHIQMSSLHVVLPDTLCLYILPLSLSD 351

Query: 272 DQIEGFEPIPSISRWYVVAGRLYLIHIKVFSPGPGAQEIFVTESDEIELHDNQDEIWSIL 93
           D +EG + IPS +RWY  +G+ YLI +KVFS GPG QE+++TESDE+ L  NQ   W   
Sbjct: 352 DPLEGAKSIPSGARWYAFSGQQYLIQMKVFSGGPGGQEVYITESDEVSLQYNQSIYWKAF 411

Query: 92  PVSEGTKKR----NQRILDASSYGLGKLTATLAY 3
            VS+    +    N RIL  +S GLG LTA+L+Y
Sbjct: 412 LVSDRIAVKHDWWNSRILKMTSEGLGNLTASLSY 445


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
           gi|223539369|gb|EEF40960.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 2256

 Score =  140 bits (354), Expect = 8e-32
 Identities = 72/153 (47%), Positives = 102/153 (66%), Gaps = 4/153 (2%)
 Frame = -2

Query: 449 NSSVAQADESMGIIHALNLGXXXXXXXXXXXVGHMQISSLHVVIPDNLLLFMSPLSLSGD 270
           NSSVA+ +  +G   ALNLG             H+Q SSL+VV+PD+L L++ P+SLSGD
Sbjct: 289 NSSVAEVNSMIGFARALNLGVTIVIVEDTRVADHVQTSSLNVVLPDSLHLYIIPMSLSGD 348

Query: 269 QIEGFEPIPSISRWYVVAGRLYLIHIKVFSPGPGAQEIFVTESDEIELHDNQDEIWSILP 90
            +E  + IP +  WYVV+GR YLI IKVFS GP A EI++TESD+++LH+ Q + W+I  
Sbjct: 349 SVEEVKAIPFMETWYVVSGRQYLIQIKVFSWGPDAHEIYITESDDLKLHNEQSDCWTIFM 408

Query: 89  VSEGTKKR----NQRILDASSYGLGKLTATLAY 3
           +S+  + +    N R+L A+S GLG+L A+L Y
Sbjct: 409 LSKDIEAKYVWQNSRVLRAASRGLGELKASLTY 441


>dbj|BAB10497.1| nuclear pore protein-like [Arabidopsis thaliana]
          Length = 1962

 Score =  137 bits (344), Expect = 1e-30
 Identities = 72/154 (46%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
 Frame = -2

Query: 452 MNSSVAQADESMGIIHALNLGXXXXXXXXXXXVGHMQISSLHVVIPDNLLLFMSPLSLSG 273
           +NSSVAQ D  +G+  AL+LG            GH+Q SS++VV PD L+L++SP S+SG
Sbjct: 288 LNSSVAQVDSLIGLTKALSLGVTTVVVEDTRVAGHIQGSSINVVTPDTLILYISPWSMSG 347

Query: 272 DQIEGFEPIPSISRWYVVAGRLYLIHIKVFSPGPGAQEIFVTESDEIELHDNQDEIWSIL 93
           D I   +P PS   WYVV+GR YLI +K+FS  P A EI++TE+D+I+L+    + W I+
Sbjct: 348 DLITESKPFPSSMHWYVVSGRQYLIQMKIFSGRPDAHEIYITETDDIKLYGKDSDYWKIV 407

Query: 92  ----PVSEGTKKRNQRILDASSYGLGKLTATLAY 3
                +S    +RN RIL+A S GLG+LT+TL Y
Sbjct: 408 SLPDELSSEYGQRNSRILNAISPGLGELTSTLTY 441


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