BLASTX nr result

ID: Scutellaria23_contig00030546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030546
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   139   2e-31
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   137   9e-31
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   135   5e-30

>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  139 bits (350), Expect = 2e-31
 Identities = 60/69 (86%), Positives = 66/69 (95%)
 Frame = +3

Query: 3    HSEKLAVAFGLIATPPGAPIRVKKNLRICLDCHTAFKYITKIVSREIIIRDTNRFHHFRD 182
            HSEKLAVAFGLIATPPGAPIRVKKNLR+C+DCHTAFK+I+K+ SREII+RD NRFHHFRD
Sbjct: 795  HSEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRD 854

Query: 183  GLCSCGDYW 209
            G CSCGDYW
Sbjct: 855  GSCSCGDYW 863


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/69 (88%), Positives = 65/69 (94%)
 Frame = +3

Query: 3    HSEKLAVAFGLIATPPGAPIRVKKNLRICLDCHTAFKYITKIVSREIIIRDTNRFHHFRD 182
            HSEKLAVAFGLIATP GAPIRVKKNLR+C+DCHTAFKYI KIVSREII+RD NRFHHF+D
Sbjct: 865  HSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKD 924

Query: 183  GLCSCGDYW 209
            G CSCGDYW
Sbjct: 925  GSCSCGDYW 933


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/69 (88%), Positives = 65/69 (94%)
 Frame = +3

Query: 3    HSEKLAVAFGLIATPPGAPIRVKKNLRICLDCHTAFKYITKIVSREIIIRDTNRFHHFRD 182
            HSEKLAVAFGLIATP GAPIRVKKNLR+C+DCHTAFKYI KIVSREII+RD NRFHHF+D
Sbjct: 838  HSEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKD 897

Query: 183  GLCSCGDYW 209
            G CSCGDYW
Sbjct: 898  GSCSCGDYW 906


>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/69 (86%), Positives = 65/69 (94%)
 Frame = +3

Query: 3   HSEKLAVAFGLIATPPGAPIRVKKNLRICLDCHTAFKYITKIVSREIIIRDTNRFHHFRD 182
           HSEKLAVAFGLIATPPGAPIRVKKNLRIC DCHT  K+I+KIVSREII+RDTNRFHHFR+
Sbjct: 718 HSEKLAVAFGLIATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFRE 777

Query: 183 GLCSCGDYW 209
           G CSCG+YW
Sbjct: 778 GSCSCGEYW 786


>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  135 bits (339), Expect = 5e-30
 Identities = 59/69 (85%), Positives = 64/69 (92%)
 Frame = +3

Query: 3   HSEKLAVAFGLIATPPGAPIRVKKNLRICLDCHTAFKYITKIVSREIIIRDTNRFHHFRD 182
           HSEKLAVAFGLIATPPG PIRVKKNLRIC+DCHT FK++ KIVSREII+RD NRFHHF+D
Sbjct: 790 HSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKD 849

Query: 183 GLCSCGDYW 209
           G CSCGDYW
Sbjct: 850 GSCSCGDYW 858


Top