BLASTX nr result

ID: Scutellaria23_contig00030530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030530
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ96689.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   4e-08
ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic ...    62   5e-08
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...    62   5e-08
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...    61   8e-08
ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [S...    61   8e-08

>dbj|BAJ96689.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 727

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -3

Query: 280 SFVCKEDSMEFLSKMQIFQNVAVDQKFELLQQCVSWILEIK 158
           SF CKE++ +FL KM++F NVAV QKFELLQ CV WILE++
Sbjct: 687 SFRCKEEAPQFLGKMRVFLNVAVSQKFELLQDCVRWILEVR 727


>ref|XP_003572557.1| PREDICTED: DNA polymerase epsilon catalytic subunit A [Brachypodium
            distachyon]
          Length = 2127

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/41 (68%), Positives = 33/41 (80%)
 Frame = -3

Query: 280  SFVCKEDSMEFLSKMQIFQNVAVDQKFELLQQCVSWILEIK 158
            SF CKE+S  FLSKM++F  VAV QKFELLQ CV WILE++
Sbjct: 2087 SFRCKEESSYFLSKMRVFLKVAVSQKFELLQDCVQWILEVR 2127


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -3

Query: 280  SFVCKEDSMEFLSKMQIFQNVAVDQKFELLQQCVSWILEI 161
            ++ CKED  EF SKMQIF NVA+ QKF+LLQ+C SWILE+
Sbjct: 2187 AYRCKEDVSEFRSKMQIFLNVAISQKFQLLQECTSWILEV 2226


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -3

Query: 280  SFVCKEDSMEFLSKMQIFQNVAVDQKFELLQQCVSWILEIK 158
            SF CKED+ EF  KMQIF N+A  QKF+LLQ+C SWILE++
Sbjct: 2167 SFRCKEDASEFREKMQIFLNIASRQKFQLLQECTSWILELR 2207


>ref|XP_002452153.1| hypothetical protein SORBIDRAFT_04g020730 [Sorghum bicolor]
            gi|241931984|gb|EES05129.1| hypothetical protein
            SORBIDRAFT_04g020730 [Sorghum bicolor]
          Length = 2135

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -3

Query: 280  SFVCKEDSMEFLSKMQIFQNVAVDQKFELLQQCVSWILEIK 158
            SF CKE+S  FLSKM++F  VAV+QKF+LLQ CV WILE++
Sbjct: 2095 SFRCKEESSYFLSKMRVFLKVAVNQKFQLLQDCVQWILEVR 2135


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