BLASTX nr result

ID: Scutellaria23_contig00030450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030450
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28942.3| unnamed protein product [Vitis vinifera]              121   5e-26
ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vin...   121   5e-26
dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]         117   7e-25
ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinu...   114   8e-24
ref|XP_002301626.1| glutamate-gated kainate-type ion channel rec...   114   1e-23

>emb|CBI28942.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 73/99 (73%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   VGYWSKDTGLSVQRPQSLKGYK------DQRLDRITWPGGIVKRPRGWEIATAERPLRIG 162
           VGYWS  +GLSV  P+ LKG +      DQ+L  +TWPGGI ++PRGWEIA  ERPLR+G
Sbjct: 337 VGYWSNYSGLSVLPPEDLKGEQNRNSLLDQKLRIVTWPGGITEKPRGWEIAANERPLRLG 396

Query: 163 FPKRVSFNEFVSE-NHNHSVQGYCIDLFLEVLKLVPYDV 276
            PKR SF +FV+E N +H VQGYCID+F   LKLVPY+V
Sbjct: 397 IPKRTSFVDFVTELNTSHKVQGYCIDVFNAALKLVPYNV 435


>ref|XP_002273713.1| PREDICTED: glutamate receptor 3.7 [Vitis vinifera]
          Length = 909

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 73/99 (73%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   VGYWSKDTGLSVQRPQSLKGYK------DQRLDRITWPGGIVKRPRGWEIATAERPLRIG 162
           VGYWS  +GLSV  P+ LKG +      DQ+L  +TWPGGI ++PRGWEIA  ERPLR+G
Sbjct: 408 VGYWSNYSGLSVLPPEDLKGEQNRNSLLDQKLRIVTWPGGITEKPRGWEIAANERPLRLG 467

Query: 163 FPKRVSFNEFVSE-NHNHSVQGYCIDLFLEVLKLVPYDV 276
            PKR SF +FV+E N +H VQGYCID+F   LKLVPY+V
Sbjct: 468 IPKRTSFVDFVTELNTSHKVQGYCIDVFNAALKLVPYNV 506


>dbj|BAL15054.1| glutamate receptor 3.1 [Solanum lycopersicum]
          Length = 866

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/100 (57%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
 Frame = +1

Query: 1   VGYWSKDTGLSVQRPQSLKGYK------DQRLDRITWPGGIVKRPRGWEIATAERPLRIG 162
           VGYWS  +GLSV  P+ L+  +      +Q L  ++WPGG  + PRGW IA  ERPLRIG
Sbjct: 369 VGYWSNFSGLSVLPPKPLQNKETAVTNLNQNLKSVSWPGGKSETPRGWVIANDERPLRIG 428

Query: 163 FPKRVSFNEFVSENHNHSVQGYCIDLFLEVLKLVPYDVHF 282
           FP+R SF EFV+ N +H+VQGYCIDLF E  KLVPYD+ F
Sbjct: 429 FPRRASFTEFVTLNASHNVQGYCIDLFYEARKLVPYDIPF 468


>ref|XP_002524180.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536549|gb|EEF38195.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 921

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/101 (54%), Positives = 71/101 (70%), Gaps = 7/101 (6%)
 Frame = +1

Query: 1   VGYWSKDTGLSV------QRPQSLKGYKDQRLDRITWPGGIVKRPRGWEIATAERPLRIG 162
           VGYWS  +G S+      Q  Q+   + DQ+L  ITWPGG +++PRGWEIA  ERPLRIG
Sbjct: 416 VGYWSSSSGFSLLPTETHQGEQTNYSHVDQKLQNITWPGGKMEKPRGWEIADDERPLRIG 475

Query: 163 FPKRVSFNEFVSE-NHNHSVQGYCIDLFLEVLKLVPYDVHF 282
            P+R SF +FV+E N +H ++GYCIDLFLE  KL+PY V +
Sbjct: 476 VPRRASFVDFVTEVNQSHKIEGYCIDLFLEARKLIPYYVPY 516


>ref|XP_002301626.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222843352|gb|EEE80899.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 861

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/101 (55%), Positives = 68/101 (67%), Gaps = 7/101 (6%)
 Frame = +1

Query: 1   VGYWSKDTGLSVQRPQSLKGYKD------QRLDRITWPGGIVKRPRGWEIATAERPLRIG 162
           VGYWS   G S+  P + KG +D      QRL  ITWPGG  K PRGW IA  ERPLRIG
Sbjct: 360 VGYWSNAAGFSLSPPDARKGKQDSNCCLDQRLHNITWPGGKSKTPRGWVIAVDERPLRIG 419

Query: 163 FPKRVSFNEFVSENH-NHSVQGYCIDLFLEVLKLVPYDVHF 282
            P R SF +FV+E H +H ++GYCID+FL+ L+LVPY V +
Sbjct: 420 VPNRASFTDFVTEVHVSHKIKGYCIDVFLKALELVPYHVPY 460


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