BLASTX nr result

ID: Scutellaria23_contig00030365 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030365
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38550.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containi...    88   6e-16
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...    87   1e-15
emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]    86   3e-15
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...    86   4e-15

>emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = +3

Query: 3   CKSGKIIEAMDLLNELSVAGFRPSSITHKLVLTAASDAKRADLIFTMHNKLVAMGLHLDL 182
           C +G+I + MDLLN++ V GF P+  THK VL A+S ++RAD+I  MH++LV MG+ LDL
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDL 541

Query: 183 NVYSNLITVLCGLKMTKKAASVLEEMRKGG 272
           + Y+ LI+  C L M ++A  V ++M   G
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKG 571


>ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/90 (46%), Positives = 62/90 (68%)
 Frame = +3

Query: 3   CKSGKIIEAMDLLNELSVAGFRPSSITHKLVLTAASDAKRADLIFTMHNKLVAMGLHLDL 182
           C +G+I + MDLLN++ V GF P+  THK VL A+S ++RAD+I  MH++LV MG+ LDL
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDL 541

Query: 183 NVYSNLITVLCGLKMTKKAASVLEEMRKGG 272
           + Y+ LI+  C L M ++A  V ++M   G
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKG 571


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/90 (45%), Positives = 65/90 (72%)
 Frame = +3

Query: 6   KSGKIIEAMDLLNELSVAGFRPSSITHKLVLTAASDAKRADLIFTMHNKLVAMGLHLDLN 185
           ++G+I +AM++LNE+SV G  P+ + H+++L A+S + +A+ +  MH +LV MGL ++  
Sbjct: 634 EAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQE 693

Query: 186 VYSNLITVLCGLKMTKKAASVLEEMRKGGF 275
            Y+NLI V C L+MTKKA SVL+ M + GF
Sbjct: 694 AYNNLIVVFCRLRMTKKATSVLKYMIRDGF 723


>emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/90 (45%), Positives = 61/90 (67%)
 Frame = +3

Query: 3   CKSGKIIEAMDLLNELSVAGFRPSSITHKLVLTAASDAKRADLIFTMHNKLVAMGLHLDL 182
           C +G+I + MDLLN++ V GF P+  THK VL A+S ++RAD+I   H++LV MG+ LDL
Sbjct: 482 CAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDL 541

Query: 183 NVYSNLITVLCGLKMTKKAASVLEEMRKGG 272
           + Y+ LI+  C L M ++A  V ++M   G
Sbjct: 542 STYNTLISTFCRLGMIRRATLVFKDMMGKG 571


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/90 (50%), Positives = 60/90 (66%)
 Frame = +3

Query: 3   CKSGKIIEAMDLLNELSVAGFRPSSITHKLVLTAASDAKRADLIFTMHNKLVAMGLHLDL 182
           CK+G + +A   L+E+ V  F P+ ITHK ++ A S +++AD I  +H KLVA GL L L
Sbjct: 716 CKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSL 775

Query: 183 NVYSNLITVLCGLKMTKKAASVLEEMRKGG 272
            VY+ LITV C L MT+KA  VL+EM K G
Sbjct: 776 TVYNTLITVFCRLGMTRKAKVVLDEMVKRG 805


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