BLASTX nr result

ID: Scutellaria23_contig00030235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030235
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
ref|XP_002518208.1| pentatricopeptide repeat-containing protein,...    97   1e-18
emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]    97   2e-18
ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
emb|CBI23741.3| unnamed protein product [Vitis vinifera]               91   7e-17

>ref|XP_002314516.1| predicted protein [Populus trichocarpa] gi|222863556|gb|EEF00687.1|
           predicted protein [Populus trichocarpa]
          Length = 632

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/105 (47%), Positives = 69/105 (65%)
 Frame = +2

Query: 14  LADDFTFSVMFKIVGDLGEVLHGKMVQAASVKNGFVLDAVVGNSLMSMYSRCGCMVYSLK 193
           L DD+T + M K+  ++G++  GK++   S+K GFVLD +V NSLMSMYS+CG     LK
Sbjct: 125 LLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTGFVLDVIVANSLMSMYSKCGGFGECLK 184

Query: 194 VFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
           +FDEMP RNV SWN ++SGYA    +S   +F +  +   VK MQ
Sbjct: 185 LFDEMPERNVGSWNVILSGYA----DSGDRNFDK-EVSGFVKDMQ 224


>ref|XP_002518208.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542804|gb|EEF44341.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 506

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 48/105 (45%), Positives = 73/105 (69%)
 Frame = +2

Query: 14  LADDFTFSVMFKIVGDLGEVLHGKMVQAASVKNGFVLDAVVGNSLMSMYSRCGCMVYSLK 193
           L DD+T + + K+ G++G ++ GK++   S+K GFVLD VV NSLMSMY +CG    +LK
Sbjct: 125 LPDDYTLATLSKVCGEIGHLIAGKIIHGLSLKIGFVLDTVVANSLMSMYCKCGEFSEALK 184

Query: 194 VFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
           +FDEMP R+V SWN +I+GY+    +S   + ++ ++ D+VK MQ
Sbjct: 185 LFDEMPERSVGSWNVVIAGYS----DSGDRNLNQ-QIVDLVKDMQ 224


>emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/105 (47%), Positives = 62/105 (59%)
 Frame = +2

Query: 14  LADDFTFSVMFKIVGDLGEVLHGKMVQAASVKNGFVLDAVVGNSLMSMYSRCGCMVYSLK 193
           L DDFT S + K+  +LG +  GK +   S++ GFV D VV NS+MSMY +CG    S K
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSDTVVANSIMSMYCKCGNFDESRK 180

Query: 194 VFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
           VFDEM +RN  SWN LI+GYA        N   R   W+ VK MQ
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYA-----VSGNCNFREETWEFVKQMQ 220



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
 Frame = +2

Query: 20  DDFTFSVMFKIV-GDLGEVLHGKMVQAASVKNGFVL----DAVVGNSLMSMYSRCGCMVY 184
           D +T S +  +  GD+G+  +G+ +    VKN  VL    D  +G  L+ MYSR   +V 
Sbjct: 227 DAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVV 286

Query: 185 SLKVFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
             +VFD M  RNV SW A+I+GY  V+      + S FR   ++ G++
Sbjct: 287 GRRVFDRMKCRNVFSWTAMINGY--VENGDSDEALSLFRDMQVIDGVE 332


>ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/105 (47%), Positives = 62/105 (59%)
 Frame = +2

Query: 14  LADDFTFSVMFKIVGDLGEVLHGKMVQAASVKNGFVLDAVVGNSLMSMYSRCGCMVYSLK 193
           L DDFT S + K+  +LG +  GK +   S++ GFV D VV NS+MSMY +CG    S K
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRK 180

Query: 194 VFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
           VFDEM +RN  SWN LI+GYA        N   R   W+ VK MQ
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYA-----VSGNCNFREETWEFVKQMQ 220



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
 Frame = +2

Query: 20  DDFTFSVMFKIV-GDLGEVLHGKMVQAASVKNGFVL----DAVVGNSLMSMYSRCGCMVY 184
           D +T S +  +  GD G+  +G+ +    VKN  VL    D  +G  L+ MYSR   +V 
Sbjct: 227 DAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDMYSRSNKVVV 286

Query: 185 SLKVFDEMPLRNVSSWNALISGYAKVDMESRSNSFSRFRLWDIVKGMQ 328
             +VFD M  RNV SW A+I+GY  V+      + S FR   ++ G++
Sbjct: 287 GRRVFDRMKCRNVFSWTAMINGY--VENGDSDEALSLFRDMQVIDGIE 332


>emb|CBI23741.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/81 (53%), Positives = 54/81 (66%)
 Frame = +2

Query: 14  LADDFTFSVMFKIVGDLGEVLHGKMVQAASVKNGFVLDAVVGNSLMSMYSRCGCMVYSLK 193
           L DDFT S + K+  +LG +  GK +   S++ GFV D VV NS+MSMY +CG    S K
Sbjct: 121 LPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMYCKCGNFEESRK 180

Query: 194 VFDEMPLRNVSSWNALISGYA 256
           VFDEM +RN  SWN LI+GYA
Sbjct: 181 VFDEMTIRNSGSWNVLIAGYA 201


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