BLASTX nr result

ID: Scutellaria23_contig00030205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00030205
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   147   7e-34
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   142   2e-32
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          129   2e-28
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   123   1e-26

>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
            vinifera]
          Length = 962

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/146 (52%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
 Frame = +3

Query: 9    LLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGIHVVTSEWIYACAMQNRVV 188
            LLRNLC+VLG KF EKLTKKVTHLLC++ GG KY+AAC+WGI  VTSEWIY C  QN VV
Sbjct: 658  LLRNLCFVLGAKFVEKLTKKVTHLLCKFTGGPKYEAACKWGIKAVTSEWIYECIKQNGVV 717

Query: 189  DLSGFCPKELTSQDREAGSYLVSQHPAHSNVISSVEDASQHLCQSLDLRNIHTVD----S 356
             +  FCPKE+T+ DR+AG  ++SQ+P  +  + S +  SQ   QS DL +I T      S
Sbjct: 718  YVDSFCPKEITAHDRQAGLCIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRS 777

Query: 357  MAMPRDGDYNSSGQKRARFLGDDNIK 434
                 +  ++S   KRAR L D++ K
Sbjct: 778  DRFNEEARHSSVHAKRARLLEDESQK 803


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  147 bits (372), Expect = 7e-34
 Identities = 76/146 (52%), Positives = 97/146 (66%), Gaps = 4/146 (2%)
 Frame = +3

Query: 9    LLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGIHVVTSEWIYACAMQNRVV 188
            LLRNLC+VLG KF EKLTKKVTHLLC++ GG KY+AAC+WGI  VTSEWIY C  QN VV
Sbjct: 658  LLRNLCFVLGAKFVEKLTKKVTHLLCKFTGGPKYEAACKWGIKAVTSEWIYECIKQNGVV 717

Query: 189  DLSGFCPKELTSQDREAGSYLVSQHPAHSNVISSVEDASQHLCQSLDLRNIHTVD----S 356
             +  FCPKE+T+ DR+AG  ++SQ+P  +  + S +  SQ   QS DL +I T      S
Sbjct: 718  YVDSFCPKEITAHDRQAGLCIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRS 777

Query: 357  MAMPRDGDYNSSGQKRARFLGDDNIK 434
                 +  ++S   KRAR L D++ K
Sbjct: 778  DRFNEEARHSSVHAKRARLLEDESQK 803


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  142 bits (359), Expect = 2e-32
 Identities = 74/144 (51%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
 Frame = +3

Query: 9    LLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGIHVVTSEWIYACAMQNRVV 188
            LLRNLC+VLG KF EKLT+KVTHLLC++  G KY+AAC+WGI  +TSEWIY C  QN VV
Sbjct: 649  LLRNLCFVLGAKFVEKLTRKVTHLLCKFTNGPKYEAACKWGICSITSEWIYECVRQNEVV 708

Query: 189  DLSGFCPKELTSQDREAGSYLVSQHPAHSNVISSVEDASQHLCQSLDLRNIHT----VDS 356
             L  F PKE+TSQD+EAG   VSQ P  +  + S E+ SQ + QS DLR+  T    +  
Sbjct: 709  ALDRFRPKEVTSQDQEAGLCTVSQFPTQAARMISGENPSQLISQSRDLRSAPTQTGSIGI 768

Query: 357  MAMPRDGDYNSSGQKRARFLGDDN 428
             +   D   ++   K+AR L  D+
Sbjct: 769  FSFGEDAQKSTKYSKKARLLKSDD 792


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  129 bits (324), Expect = 2e-28
 Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 10/169 (5%)
 Frame = +3

Query: 3    KQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGIHVVTSEWIYACAMQNR 182
            + LLRNLC+VLG KF EKLT+KVTHLLC++  G+KY+AACRWGI ++TSEWIY C  +N 
Sbjct: 648  RSLLRNLCFVLGAKFVEKLTRKVTHLLCKFTIGEKYEAACRWGICLITSEWIYECVRRNE 707

Query: 183  VVDLSGFCPKELTSQDREAGSYLVSQHPAH-SNVISSVEDASQHLCQSLDLRNIHT-VDS 356
            VV +  F PK +TSQD+ AG  +VSQ P   + +IS V   SQ+  QS DL++  T +  
Sbjct: 708  VVAVDQFRPKVVTSQDQVAGLCIVSQFPTQPAQMISGV---SQYTSQSQDLKSEPTQIGG 764

Query: 357  MAMPRDGD---YNSSGQKRARFLGDDNIKY-----PSFCDSTTDINANG 479
             ++   G+    +S   K+AR L     K          DS  +IN++G
Sbjct: 765  TSITSFGEEVRKSSDFSKKARLLESGGQKSLLSSGVHLSDSICNINSSG 813


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  123 bits (309), Expect = 1e-26
 Identities = 62/112 (55%), Positives = 77/112 (68%), Gaps = 1/112 (0%)
 Frame = +3

Query: 3    KQLLRNLCYVLGGKFAEKLTKKVTHLLCEYAGGDKYQAACRWGIHVVTSEWIYACAMQNR 182
            + LLRNLC+ LG K+ EKLTKKVTHLLC++  G KY+AAC+WGI  VTSEWI+ C  QN 
Sbjct: 675  RNLLRNLCFHLGAKYGEKLTKKVTHLLCKFTNGPKYEAACKWGIQSVTSEWIFECVKQNG 734

Query: 183  VVDLSGFCPKELTSQDREAGSYLVSQHPAHSNVISSVED-ASQHLCQSLDLR 335
            VV +  F PKE+T+QDR+AG   VSQ P  +  +  + D  SQ   QS  LR
Sbjct: 735  VVAIDQFLPKEVTAQDRDAGICTVSQFP--TQAVQMISDLPSQLSSQSQTLR 784


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