BLASTX nr result

ID: Scutellaria23_contig00029937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029937
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279153.1| PREDICTED: DNA replication complex GINS prot...   177   8e-43
ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replicat...   165   3e-39
ref|XP_003531624.1| PREDICTED: DNA replication complex GINS prot...   164   9e-39
gb|ACU21110.1| unknown [Glycine max]                                  164   9e-39
gb|AFK42443.1| unknown [Medicago truncatula]                          161   5e-38

>ref|XP_002279153.1| PREDICTED: DNA replication complex GINS protein SLD5 [Vitis
           vinifera] gi|296083231|emb|CBI22867.3| unnamed protein
           product [Vitis vinifera]
          Length = 220

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/128 (71%), Positives = 107/128 (83%), Gaps = 2/128 (1%)
 Frame = +1

Query: 79  MDSGAGEGS--TAEDYESLMSTTDAELLKNAWRNEKAAPEILNYEANLVQRSRQQIQLME 252
           M SG+ EGS   A+DYESL++TTD ELLK AWRNEKAAPEIL+++  LVQRSR+QIQLME
Sbjct: 1   MASGSEEGSGFPADDYESLIATTDVELLKRAWRNEKAAPEILHFQTALVQRSREQIQLME 60

Query: 253 EMLVEFSNNGIDPLTVSLYQMDLDRTMFLLRSYLRTRLQKIEKHVFHIQKTEEQWNQLSK 432
           E + EF  NG DPLTVSLYQMDLDRT FLLRSYLR RLQKIEK++FHI KT + W++LS+
Sbjct: 61  ETVEEFGENGTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKT-DVWSRLSE 119

Query: 433 QEQKFTNR 456
           QEQKF  R
Sbjct: 120 QEQKFAKR 127


>ref|XP_003529921.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication complex GINS
           protein SLD5-like [Glycine max]
          Length = 226

 Score =  165 bits (418), Expect = 3e-39
 Identities = 83/122 (68%), Positives = 101/122 (82%), Gaps = 1/122 (0%)
 Frame = +1

Query: 85  SGAGEG-STAEDYESLMSTTDAELLKNAWRNEKAAPEILNYEANLVQRSRQQIQLMEEML 261
           + A EG S  +DYE+L++TTDAELLK AWRNEKAAPEIL YE++LV R ++ IQ +EE +
Sbjct: 4   NSAAEGVSMGDDYEALIATTDAELLKRAWRNEKAAPEILRYESDLVSRVKKVIQFLEETV 63

Query: 262 VEFSNNGIDPLTVSLYQMDLDRTMFLLRSYLRTRLQKIEKHVFHIQKTEEQWNQLSKQEQ 441
            E S+ G +PL+VSLYQMDLDRT+FLLRSYLR R+QKIEK VFHIQKTEE WN+LSK E+
Sbjct: 64  EEKSSGGTNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKFVFHIQKTEELWNRLSKDEK 123

Query: 442 KF 447
            F
Sbjct: 124 DF 125


>ref|XP_003531624.1| PREDICTED: DNA replication complex GINS protein SLD5-like [Glycine
           max]
          Length = 226

 Score =  164 bits (414), Expect = 9e-39
 Identities = 85/122 (69%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +1

Query: 85  SGAGEG-STAEDYESLMSTTDAELLKNAWRNEKAAPEILNYEANLVQRSRQQIQLMEEML 261
           S A EG S  +DYE+L++TTD ELLK AWRNEKAAPEIL YE+ LV R  + IQLMEE++
Sbjct: 4   SSAAEGVSMDDDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLMEEIV 63

Query: 262 VEFSNNGIDPLTVSLYQMDLDRTMFLLRSYLRTRLQKIEKHVFHIQKTEEQWNQLSKQEQ 441
            E S+ G DPL+VSLYQMDLDRT+FLLRSYLR R+QKIEK+VFHIQKTEE  N+LSK E+
Sbjct: 64  EEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLSKYEK 123

Query: 442 KF 447
            F
Sbjct: 124 DF 125


>gb|ACU21110.1| unknown [Glycine max]
          Length = 226

 Score =  164 bits (414), Expect = 9e-39
 Identities = 85/122 (69%), Positives = 100/122 (81%), Gaps = 1/122 (0%)
 Frame = +1

Query: 85  SGAGEG-STAEDYESLMSTTDAELLKNAWRNEKAAPEILNYEANLVQRSRQQIQLMEEML 261
           S A EG S  +DYE+L++TTD ELLK AWRNEKAAPEIL YE+ LV R  + IQLMEE++
Sbjct: 4   SSAAEGVSMDDDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLMEEIV 63

Query: 262 VEFSNNGIDPLTVSLYQMDLDRTMFLLRSYLRTRLQKIEKHVFHIQKTEEQWNQLSKQEQ 441
            E S+ G DPL+VSLYQMDLDRT+FLLRSYLR R+QKIEK+VFHIQKTEE  N+LSK E+
Sbjct: 64  EEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLSKYEK 123

Query: 442 KF 447
            F
Sbjct: 124 DF 125


>gb|AFK42443.1| unknown [Medicago truncatula]
          Length = 227

 Score =  161 bits (408), Expect = 5e-38
 Identities = 81/129 (62%), Positives = 104/129 (80%), Gaps = 3/129 (2%)
 Frame = +1

Query: 79  MDSGAGEG---STAEDYESLMSTTDAELLKNAWRNEKAAPEILNYEANLVQRSRQQIQLM 249
           M S + EG   S A+DY++L+STTD ELLK AWRNEKAAPEIL +E++L+ R + QI+LM
Sbjct: 1   MGSRSAEGEQSSLADDYDALISTTDVELLKRAWRNEKAAPEILRFESDLINRVKGQIELM 60

Query: 250 EEMLVEFSNNGIDPLTVSLYQMDLDRTMFLLRSYLRTRLQKIEKHVFHIQKTEEQWNQLS 429
           EE + E  + G DPL+VSLYQMDLDRT+FLLRSYLR R+ KIEK++FHI+KT+E WN+LS
Sbjct: 61  EETVEEKLSVGSDPLSVSLYQMDLDRTLFLLRSYLRIRILKIEKYMFHIRKTQELWNRLS 120

Query: 430 KQEQKFTNR 456
           + E+ FT R
Sbjct: 121 RDEKLFTER 129


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