BLASTX nr result

ID: Scutellaria23_contig00029875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029875
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   137   1e-30
ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002513723.1| ubiquitin-protein ligase, putative [Ricinus ...   135   3e-30
ref|XP_003540287.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   134   1e-29

>ref|XP_002298264.1| predicted protein [Populus trichocarpa] gi|222845522|gb|EEE83069.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/78 (78%), Positives = 72/78 (92%)
 Frame = -1

Query: 234 MYEIEIPCYFLCPISMQLMKDPVTAASGITYDRENIEKWLFSCKNTTCPVTKQDIATSDL 55
           M +I++P +FLCPIS+QLM+DPVT ++GITYDRENIEKWLFSCKN TCPVTKQ++ T DL
Sbjct: 1   MDQIDVPYHFLCPISLQLMRDPVTVSTGITYDRENIEKWLFSCKNKTCPVTKQELFTKDL 60

Query: 54  TPNHTLRRLIQAWCTLHA 1
           TPNHTLRRLIQAWCTL+A
Sbjct: 61  TPNHTLRRLIQAWCTLNA 78


>ref|XP_003543414.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 403

 Score =  137 bits (344), Expect = 1e-30
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -1

Query: 234 MYEIEIPCYFLCPISMQLMKDPVTAASGITYDRENIEKWLFSCKNTTCPVTKQDIATSDL 55
           M EIEIP +FLCPIS+QLM+DPVT  +GITYDRENIE+WLFSCKN TCPVTKQ +   DL
Sbjct: 1   MDEIEIPAHFLCPISLQLMRDPVTVCTGITYDRENIERWLFSCKNNTCPVTKQCLLNHDL 60

Query: 54  TPNHTLRRLIQAWCTLHA 1
           TPNHTLRRLIQ+WCTL+A
Sbjct: 61  TPNHTLRRLIQSWCTLNA 78


>ref|XP_002313503.1| predicted protein [Populus trichocarpa] gi|222849911|gb|EEE87458.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  135 bits (341), Expect = 3e-30
 Identities = 59/78 (75%), Positives = 71/78 (91%)
 Frame = -1

Query: 234 MYEIEIPCYFLCPISMQLMKDPVTAASGITYDRENIEKWLFSCKNTTCPVTKQDIATSDL 55
           M +I++P +FLCPIS+QLM+DPVT ++GITYDRENIE+WLFSCKN TCPVTKQ++   DL
Sbjct: 1   MDQIDVPYHFLCPISLQLMRDPVTISTGITYDRENIERWLFSCKNNTCPVTKQELFGKDL 60

Query: 54  TPNHTLRRLIQAWCTLHA 1
           TPNHTLRRLIQAWCTL+A
Sbjct: 61  TPNHTLRRLIQAWCTLNA 78


>ref|XP_002513723.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547174|gb|EEF48670.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/77 (79%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = -1

Query: 228 EIEIPCYFLCPISMQLMKDPVTAASGITYDRENIEKWLFSCKNTTCPVTKQDIAT-SDLT 52
           EI+IPC+FLCPIS+QLM+DPVT ++GITYDRENIE+WLF+CKN TCPVTKQ I    DLT
Sbjct: 2   EIDIPCHFLCPISLQLMRDPVTVSTGITYDRENIERWLFACKNNTCPVTKQVILNDEDLT 61

Query: 51  PNHTLRRLIQAWCTLHA 1
           PNHTLRRLIQAWCTL+A
Sbjct: 62  PNHTLRRLIQAWCTLNA 78


>ref|XP_003540287.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 403

 Score =  134 bits (336), Expect = 1e-29
 Identities = 60/78 (76%), Positives = 68/78 (87%)
 Frame = -1

Query: 234 MYEIEIPCYFLCPISMQLMKDPVTAASGITYDRENIEKWLFSCKNTTCPVTKQDIATSDL 55
           M EIEIP +FLCPIS+QLM+DPVT  +GITYDRENIE+WLFSCKN TCPVTKQ +    L
Sbjct: 1   MDEIEIPAHFLCPISLQLMRDPVTVCTGITYDRENIERWLFSCKNNTCPVTKQCLLDHGL 60

Query: 54  TPNHTLRRLIQAWCTLHA 1
           TPNHTLRRLIQ+WCTL+A
Sbjct: 61  TPNHTLRRLIQSWCTLNA 78


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