BLASTX nr result

ID: Scutellaria23_contig00029833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029833
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containin...    97   2e-18
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin...    96   2e-18
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...    96   2e-18
ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arab...    95   5e-18
dbj|BAJ34607.1| unnamed protein product [Thellungiella halophila]      94   9e-18

>ref|XP_003524539.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 345

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 42/59 (71%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
 Frame = -1

Query: 189 NPPGNKGTSHIFYKTRICAKFMEGTCRNGEHCTFAHGAEDLREPPPNWQELI--REKER 19
           +P  NKGTSHIF+KTRICAKF  G CRNGE+C FAHG ED+R+PPPNWQEL+  R +ER
Sbjct: 72  HPALNKGTSHIFFKTRICAKFRAGACRNGENCNFAHGLEDMRQPPPNWQELVGLRNEER 130


>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 347

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
 Frame = -1

Query: 189 NPPGNKGTSHIFYKTRICAKFMEGTCRNGEHCTFAHGAEDLREPPPNWQELI--REKERG 16
           +P  NKGTSHIF+KTRICAKF  G CRNGE+C FAHG ED+R+PPPNWQEL+  R +ER 
Sbjct: 72  HPAVNKGTSHIFFKTRICAKFRVGACRNGENCNFAHGLEDMRQPPPNWQELVGLRGEERP 131

Query: 15  SGSG 4
             +G
Sbjct: 132 PMAG 135


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/63 (66%), Positives = 52/63 (82%), Gaps = 4/63 (6%)
 Frame = -1

Query: 189 NPPGNKGTSHIFYKTRICAKFMEGTCRNGEHCTFAHGAEDLREPPPNWQELI----REKE 22
           N P ++GTS+IF+KTRICAKF  G CRNGE+C FAHG ED+R+PPPNWQEL+    RE+E
Sbjct: 75  NAPTSRGTSNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNWQELVNVGGREEE 134

Query: 21  RGS 13
           RG+
Sbjct: 135 RGT 137


>ref|XP_002883175.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329015|gb|EFH59434.1| zinc finger
           (CCCH-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 389

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 43/63 (68%), Positives = 49/63 (77%), Gaps = 7/63 (11%)
 Frame = -1

Query: 186 PPGNKGTSHIFYKTRICAKFMEGTCRNGEHCTFAHGAEDLREPPPNWQELI-------RE 28
           PP NKGT++IFYKTR+CAKF  GTCRNGE C FAHG EDLR+PP NWQE++       RE
Sbjct: 96  PPVNKGTANIFYKTRMCAKFRAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPPGQDRE 155

Query: 27  KER 19
           KER
Sbjct: 156 KER 158


>dbj|BAJ34607.1| unnamed protein product [Thellungiella halophila]
          Length = 391

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/62 (67%), Positives = 49/62 (79%), Gaps = 6/62 (9%)
 Frame = -1

Query: 186 PPGNKGTSHIFYKTRICAKFMEGTCRNGEHCTFAHGAEDLREPPPNWQELI------REK 25
           PP NKGT++IFYKTR+CAKF  GTCRNGE C FAHG EDLR+PP NWQE++      RE+
Sbjct: 99  PPVNKGTANIFYKTRMCAKFKAGTCRNGELCNFAHGIEDLRQPPSNWQEIVGPPVQDRER 158

Query: 24  ER 19
           ER
Sbjct: 159 ER 160


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