BLASTX nr result

ID: Scutellaria23_contig00029777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029777
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m...   280   3e-73
ref|XP_002307758.1| high mobility group family [Populus trichoca...   280   5e-73
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l...   276   4e-72
gb|ABK95398.1| unknown [Populus trichocarpa]                          276   4e-72
ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [...   270   3e-70

>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
          Length = 324

 Score =  280 bits (717), Expect = 3e-73
 Identities = 154/293 (52%), Positives = 182/293 (62%), Gaps = 37/293 (12%)
 Frame = -3

Query: 770 PLPLASHDDVVKDPTLFINTIRSFHFAIGSKFQVPVIGGKELNLHVLYIEVTRRGGYNKV 591
           P PLA+HD+V+ DP +F +T+R FHF + +KF +PVIGGKEL+LHVLY EVTRRGG+ KV
Sbjct: 19  PPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKV 78

Query: 590 VSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXXFRIQ-----PSIPINH-- 432
           V+EKKWRE+  VF+FS  TTSAS+ LRKH             F  Q     P  P +   
Sbjct: 79  VAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFSFGS 138

Query: 431 --------------------TGPPSFQAIGTIDAKLDCGYLVSVKLGNETLNGVLYHPGY 312
                                GPPS +  GTID K DCGYLV+VKLG+E L GVLYHP  
Sbjct: 139 PTSENELALVEYTPKTTSFSPGPPS-EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPEQ 197

Query: 311 P---NAPPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXR-------SGYNFFFAEKHSMFK 162
           P   +  P ++  IVPYT                           SGYNFFFAEKH   K
Sbjct: 198 PPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLK 257

Query: 161 SLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEKLKM 3
           SLYPNREREFTKMIGE+WN+LSPEER+VYQN GLKDKERY+ ELKEYKEK++M
Sbjct: 258 SLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRM 310


>ref|XP_002307758.1| high mobility group family [Populus trichocarpa]
           gi|222857207|gb|EEE94754.1| high mobility group family
           [Populus trichocarpa]
          Length = 329

 Score =  280 bits (715), Expect = 5e-73
 Identities = 158/313 (50%), Positives = 190/313 (60%), Gaps = 38/313 (12%)
 Frame = -3

Query: 827 MSPEKPMPLATNAVNESFLPLPLASHDDVVKDPTLFINTIRSFHFAIGSKFQVPVIGGKE 648
           MSP     L     N+ + P PLASH+DVV DP++F +T+R FHF +G+KF +PVIGGKE
Sbjct: 1   MSPGSKRKLKAGMENKHY-PAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKE 59

Query: 647 LNLHVLYIEVTRRGGYNKVVSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXX 468
           L+L VLY+E T RGGY+KVV+EKKWRE+  VF FSA TTSAS+ L+KH            
Sbjct: 60  LDLQVLYVETTNRGGYDKVVAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVH 119

Query: 467 XFRIQPSI--------------------------PINHTGPPS------FQAIGTIDAKL 384
            F+IQ  +                          PI     PS      F A GTI+ K 
Sbjct: 120 FFKIQGPVSTPAVAFPLGSPSSKTELAIVEYSPEPIRDCPDPSTESSSSFSASGTIEGKF 179

Query: 383 DCGYLVSVKLGNETLNGVLYHPGYP---NAPPTTSTTIVPYTXXXXXXXXXXXXXXXXXX 213
           DCGYLVSV+LG+E L+GVLYHP      N+ P     IVPYT                  
Sbjct: 180 DCGYLVSVQLGSEVLHGVLYHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSY 239

Query: 212 XR---SGYNFFFAEKHSMFKSLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERY 42
            +   SGYNFFFAEKH   KSLYPNREREFTKMIG++W+SLS EER+VYQN GLKDKERY
Sbjct: 240 PKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERY 299

Query: 41  QNELKEYKEKLKM 3
           + ELKEYKEKL++
Sbjct: 300 KRELKEYKEKLQL 312


>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
           gi|449519744|ref|XP_004166894.1| PREDICTED: high
           mobility group B protein 9-like [Cucumis sativus]
          Length = 324

 Score =  276 bits (707), Expect = 4e-72
 Identities = 153/293 (52%), Positives = 183/293 (62%), Gaps = 37/293 (12%)
 Frame = -3

Query: 770 PLPLASHDDVVKDPTLFINTIRSFHFAIGSKFQVPVIGGKELNLHVLYIEVTRRGGYNKV 591
           P  LA+HD+V+ DP +F +T+R FHF + +KF +PVIGGKEL+LHVLY EVTRRGG+ KV
Sbjct: 19  PPSLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKV 78

Query: 590 VSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXXFRIQ-----PSIP----- 441
           V+EKKWRE+  VF+FS  TTSAS+ LRKH             F  Q     P  P     
Sbjct: 79  VAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICVPQAPFPFGS 138

Query: 440 ---------INHT--------GPPSFQAIGTIDAKLDCGYLVSVKLGNETLNGVLYHPGY 312
                    + +T        GPPS +  GTID K DCGYLV+VKLG+E L GVLYHP  
Sbjct: 139 PTSENELALVEYTPKTTSFSPGPPS-EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQ 197

Query: 311 P---NAPPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXR-------SGYNFFFAEKHSMFK 162
           P   +  P ++  IVPYT                           SGYNFFFAEKH   K
Sbjct: 198 PPPSDLRPLSTNAIVPYTGGRYRHSGRRHRRSRRKGDPNHPKPNRSGYNFFFAEKHYKLK 257

Query: 161 SLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEKLKM 3
           SLYPNREREFTKMIGE+WN+LSPEER+VYQN GLKDKERY+ ELKEYKEK+++
Sbjct: 258 SLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKEKMRL 310


>gb|ABK95398.1| unknown [Populus trichocarpa]
          Length = 317

 Score =  276 bits (707), Expect = 4e-72
 Identities = 153/294 (52%), Positives = 183/294 (62%), Gaps = 38/294 (12%)
 Frame = -3

Query: 770 PLPLASHDDVVKDPTLFINTIRSFHFAIGSKFQVPVIGGKELNLHVLYIEVTRRGGYNKV 591
           P PLASH+DVV DP++F +T+R FHF +G+KF +PVIGGKEL+L VLY+E T RGGY+KV
Sbjct: 7   PAPLASHEDVVNDPSVFWDTLRRFHFVMGTKFMIPVIGGKELDLQVLYVETTNRGGYDKV 66

Query: 590 VSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXXFRIQPSI----------- 444
           V+EKKWRE+  VF FSA TTSAS+ L+KH             F+IQ  +           
Sbjct: 67  VAEKKWREVGSVFCFSATTTSASFVLKKHYFSLLYHYEQVHFFKIQGPVSTPAVAFPLGS 126

Query: 443 ---------------PINHTGPPS------FQAIGTIDAKLDCGYLVSVKLGNETLNGVL 327
                          PI     PS      F A GTI+ K DCGYLVSV+LG+E L+GVL
Sbjct: 127 PSSKTELAIVEYSPEPIRDCPDPSTESSSSFSASGTIEGKFDCGYLVSVQLGSEVLHGVL 186

Query: 326 YHPGYP---NAPPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXR---SGYNFFFAEKHSMF 165
           YHP      N+ P     IVPYT                   +   SGYNFFFAEKH   
Sbjct: 187 YHPDQQDLSNSIPQYDGAIVPYTPNRRRRRRRSRRSGDPSYPKPNRSGYNFFFAEKHYKL 246

Query: 164 KSLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEKLKM 3
           KSLYPNREREFTKMIG++W+SLS EER+VYQN GLKDKERY+ ELKEYKEKL++
Sbjct: 247 KSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKEKLQL 300


>ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [Vitis vinifera]
           gi|302141699|emb|CBI18902.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  270 bits (691), Expect = 3e-70
 Identities = 145/301 (48%), Positives = 188/301 (62%), Gaps = 29/301 (9%)
 Frame = -3

Query: 824 SPEKPMPLATNAVNESFLPLPLASHDDVVKDPTLFINTIRSFHFAIGSKFQVPVIGGKEL 645
           S E+      N    +   +   +H+D+V   +LF +T+RSFH+ +G+K  +PVIGGK+L
Sbjct: 3   SQERAEDSTPNGSGGNLYSVSFVTHEDIVSHSSLFWDTLRSFHYEMGTKLSIPVIGGKQL 62

Query: 644 NLHVLYIEVTRRGGYNKVVSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXX 465
           NL+VLY+EVTRRGGY+KVV +KKWRE+S VF FS  TTSASY LRKH             
Sbjct: 63  NLYVLYVEVTRRGGYHKVVMDKKWREVSSVFNFSPTTTSASYVLRKHYYNILRKYERAYF 122

Query: 464 FRIQP-----SIPI--------------NHTGPP---SFQAIGTIDAKLDCGYLVSVKLG 351
            +  P     SIP+              N + PP      A+GTI+AK DCGYLVSVK+G
Sbjct: 123 LKGPPLNATASIPVSDLSNLQQTADARRNASNPPIGAPILAVGTINAKFDCGYLVSVKMG 182

Query: 350 NETLNGVLYHPGYPN-------APPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXRSGYNF 192
           +ETL+GVLYHPG P+       +  T S T++                      RSGYNF
Sbjct: 183 SETLSGVLYHPGQPSSYTPIRTSNTTASQTLITNKAARKKKRKRGGEPGRPKPNRSGYNF 242

Query: 191 FFAEKHSMFKSLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEK 12
           FF+EKH++FKSLYP+REREFTKMIGE+W+SLS EE+ VYQ  G+KDKERY+ E+KEYKE+
Sbjct: 243 FFSEKHALFKSLYPDREREFTKMIGESWSSLSLEEKEVYQKLGIKDKERYKKEMKEYKER 302

Query: 11  L 9
           +
Sbjct: 303 M 303


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