BLASTX nr result

ID: Scutellaria23_contig00029656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029656
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...    68   9e-10
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               62   5e-08
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    61   8e-08

>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 38/86 (44%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   VAVFLGIRGADXXXXXXXXXXXXXXXXXXXRTELFWKVLDEMSERNVDFDVYTYVSVITA 180
           V VFLG +  +                   + ELFWKV D M    V  DVYTY ++I+A
Sbjct: 165 VNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISA 224

Query: 181 HCKVGKAREGERVLCEMEEKGCGPNL 258
           HCKVG  ++ +RVL EM EKGC PNL
Sbjct: 225 HCKVGNVKDAKRVLLEMGEKGCSPNL 250


>ref|XP_002321748.1| predicted protein [Populus trichocarpa] gi|222868744|gb|EEF05875.1|
           predicted protein [Populus trichocarpa]
          Length = 1041

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 91  RTELFWKVLDEMSERNVDFDVYTYVSVITAHCKVGKAREGERVLCEMEEKGCGPNL 258
           + ELFW+  + M E NV  DVYTY  +I AH + G A+EG+R+L EMEEKGC P+L
Sbjct: 216 KLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSL 271


>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/86 (44%), Positives = 47/86 (54%)
 Frame = +1

Query: 1   VAVFLGIRGADXXXXXXXXXXXXXXXXXXXRTELFWKVLDEMSERNVDFDVYTYVSVITA 180
           V+VFLG +  +                   R ELFWKV   M    V  DVYTY ++I A
Sbjct: 183 VSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVP-DVYTYTNLINA 241

Query: 181 HCKVGKAREGERVLCEMEEKGCGPNL 258
           +C+VGK  EG+ VL +MEEKGC PNL
Sbjct: 242 YCRVGKVEEGKHVLFDMEEKGCIPNL 267


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/80 (41%), Positives = 42/80 (52%)
 Frame = +1

Query: 1   VAVFLGIRGADXXXXXXXXXXXXXXXXXXXRTELFWKVLDEMSERNVDFDVYTYVSVITA 180
           V VFLG +  +                   + ELFWKV D M    V  DVYTY ++I+A
Sbjct: 174 VNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISA 233

Query: 181 HCKVGKAREGERVLCEMEEK 240
           HCKVG  ++ +RVL EM EK
Sbjct: 234 HCKVGNVKDAKRVLLEMGEK 253


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +1

Query: 97  ELFWKVLDEMSERNVDFDVYTYVSVITAHCKVGKAREGERVLCEMEEKGCGPN 255
           ELFWKV + M +  + FDVYTY  ++ A CK G  R  +RVL EM+EKG  PN
Sbjct: 210 ELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262


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