BLASTX nr result

ID: Scutellaria23_contig00029613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029613
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...   103   1e-20
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...   103   1e-20
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]   103   1e-20
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   103   2e-20
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...   100   2e-19

>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 16/113 (14%)
 Frame = +1

Query: 1   EKERLARKIQKALLQTLNVQTANSRLHPLLYGALPMGYIPTFNGYNY------------- 141
           EKER ARK QKA  Q  N+ +A+S  HP L+GALP+GY+P +NGY Y             
Sbjct: 194 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRM 253

Query: 142 ---QNQRAFPSVVPPLKQGSTVRGATPDLSSIFAPNNYAVRPASYVQSAYPAV 291
              Q+Q AF +++P + QGS +R   PDL+   AP NYAV  ASY+ SAYPA+
Sbjct: 254 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPAL 306


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 16/113 (14%)
 Frame = +1

Query: 1   EKERLARKIQKALLQTLNVQTANSRLHPLLYGALPMGYIPTFNGYNY------------- 141
           EKER ARK QKA  Q  N+ +A+S  HP L+GALP+GY+P +NGY Y             
Sbjct: 184 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRM 243

Query: 142 ---QNQRAFPSVVPPLKQGSTVRGATPDLSSIFAPNNYAVRPASYVQSAYPAV 291
              Q+Q AF +++P + QGS +R   PDL+   AP NYAV  ASY+ SAYPA+
Sbjct: 244 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPAL 296


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 16/113 (14%)
 Frame = +1

Query: 1   EKERLARKIQKALLQTLNVQTANSRLHPLLYGALPMGYIPTFNGYNY------------- 141
           EKER ARK QKA  Q  N+ +A+S  HP L+GALP+GY+P +NGY Y             
Sbjct: 238 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQAPGAYGLMQYRM 297

Query: 142 ---QNQRAFPSVVPPLKQGSTVRGATPDLSSIFAPNNYAVRPASYVQSAYPAV 291
              Q+Q AF +++P + QGS +R   PDL+   AP NYAV  ASY+ SAYPA+
Sbjct: 298 PPMQSQAAFHNMIPQVNQGSAMRAIAPDLARAVAPRNYAVPSASYMGSAYPAL 350


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score =  103 bits (256), Expect = 2e-20
 Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 17/114 (14%)
 Frame = +1

Query: 1   EKERLARKIQKALLQTLNVQTANSRLHPLLYGALPMGYIPTFNGYNY------------- 141
           EKER AR+ QK   Q  N+  A+S+ HP L+GALPMGY+P +NGY Y             
Sbjct: 184 EKERQARRAQKVQSQASNLPNADSQ-HPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRL 242

Query: 142 ---QNQRAFPSVVPPLKQGSTVRGAT-PDLSSIFAPNNYAVRPASYVQSAYPAV 291
              Q+Q AF S++PP+ QG+ +RG   PDL     P NYA+ PASYV SAYPAV
Sbjct: 243 PPLQSQPAFHSIIPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAV 296


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
           gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
           Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 55/113 (48%), Positives = 68/113 (60%), Gaps = 16/113 (14%)
 Frame = +1

Query: 1   EKERLARKIQKALLQTLNVQTANSRLHPLLYGALPMGYIPTFNGYNYQ------------ 144
           EKER ARK QKA  Q  NV  A+S+ HP L+GA+P+GY+P +NGY YQ            
Sbjct: 191 EKERQARKAQKAQSQATNVLNADSQ-HPSLFGAMPLGYVPPYNGYGYQAPGSYGLMQYHL 249

Query: 145 ----NQRAFPSVVPPLKQGSTVRGATPDLSSIFAPNNYAVRPASYVQSAYPAV 291
               NQ  FP+++P L QG+ +RG  PDL    A  NYA+ PASY  SAYP V
Sbjct: 250 PPMQNQSGFPNMIPQLNQGNAMRGIPPDLGPGMATRNYAMPPASY--SAYPGV 300


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