BLASTX nr result

ID: Scutellaria23_contig00029539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029539
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...   251   9e-65
emb|CBI34863.3| unnamed protein product [Vitis vinifera]              251   9e-65
ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   245   6e-63
ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotei...   228   6e-58
ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore...   228   6e-58

>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
            vinifera]
          Length = 2363

 Score =  251 bits (641), Expect = 9e-65
 Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
 Frame = -3

Query: 654  PAHGCSQLMLAPKSLGTALVTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSF 475
            P   C QL++APK LGTALVTV+DIGL P L+ASS VQV ++DWI+I +GE IS+ EGS 
Sbjct: 1081 PGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQVADVDWIRITSGEEISLMEGSV 1140

Query: 474  QSINFSVGVADGRTFDPSQYKYMNIRVHVEENIVKVVED-YDFPIHTDGYVHGSKFSLRA 298
            QSI    GV DG TFD SQY YMNI+VH+E++IV +V+D  D      GYV+  KF + A
Sbjct: 1141 QSIIVMAGVDDGSTFDASQYVYMNIQVHIEDHIVDLVDDDNDISSIGGGYVNSPKFMILA 1200

Query: 297  TRLGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGS 118
              LGVT +Y+SA Q SG EI S  +KVEVYAPPRIHP DIFLV GA+YVL V+GGP+IG 
Sbjct: 1201 KHLGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGV 1260

Query: 117  HVQYSSLDGQTAQIHKFSGRLLAISPGNSTLVATI 13
             ++Y+SLD + A ++K SGRL AISPGNSTLVAT+
Sbjct: 1261 VIEYASLDDRIATVNKSSGRLSAISPGNSTLVATV 1295


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score =  251 bits (641), Expect = 9e-65
 Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
 Frame = -3

Query: 654  PAHGCSQLMLAPKSLGTALVTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSF 475
            P   C QL++APK LGTALVTV+DIGL P L+ASS VQV ++DWI+I +GE IS+ EGS 
Sbjct: 1006 PGLQCLQLIVAPKGLGTALVTVYDIGLAPHLSASSVVQVADVDWIRITSGEEISLMEGSV 1065

Query: 474  QSINFSVGVADGRTFDPSQYKYMNIRVHVEENIVKVVED-YDFPIHTDGYVHGSKFSLRA 298
            QSI    GV DG TFD SQY YMNI+VH+E++IV +V+D  D      GYV+  KF + A
Sbjct: 1066 QSIIVMAGVDDGSTFDASQYVYMNIQVHIEDHIVDLVDDDNDISSIGGGYVNSPKFMILA 1125

Query: 297  TRLGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGS 118
              LGVT +Y+SA Q SG EI S  +KVEVYAPPRIHP DIFLV GA+YVL V+GGP+IG 
Sbjct: 1126 KHLGVTILYVSARQASGYEIASNQIKVEVYAPPRIHPPDIFLVPGAAYVLNVKGGPQIGV 1185

Query: 117  HVQYSSLDGQTAQIHKFSGRLLAISPGNSTLVATI 13
             ++Y+SLD + A ++K SGRL AISPGNSTLVAT+
Sbjct: 1186 VIEYASLDDRIATVNKSSGRLSAISPGNSTLVATV 1220


>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
            gi|223539369|gb|EEF40960.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 2256

 Score =  245 bits (625), Expect = 6e-63
 Identities = 122/214 (57%), Positives = 163/214 (76%)
 Frame = -3

Query: 654  PAHGCSQLMLAPKSLGTALVTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSF 475
            P   CSQL L+PK LGTA+VTV+DIGL P +AAS+ VQV E+DWIKI+TG+ IS+ EG  
Sbjct: 997  PGLQCSQLTLSPKGLGTAVVTVYDIGLAPIVAASAVVQVAEVDWIKIVTGQEISLMEGQI 1056

Query: 474  QSINFSVGVADGRTFDPSQYKYMNIRVHVEENIVKVVEDYDFPIHTDGYVHGSKFSLRAT 295
             S++   G++DGRTFDPSQYKYM I V +E++IV++  +    +   GYV G KF + A 
Sbjct: 1057 ASMDLVAGISDGRTFDPSQYKYMEIHVWIEDDIVELTGNNVSNLG-GGYVLGPKFKIIAK 1115

Query: 294  RLGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSH 115
             LG+TT+Y+SA Q SG EI+SQP+K+EVYAP R+HP DIFLV G+SYVLTV+GGP IG +
Sbjct: 1116 DLGITTLYVSAKQQSGHEILSQPIKIEVYAPLRVHPQDIFLVPGSSYVLTVKGGPTIGVY 1175

Query: 114  VQYSSLDGQTAQIHKFSGRLLAISPGNSTLVATI 13
            V+Y+SLD   A + + SG+L  ISPGN+T+++T+
Sbjct: 1176 VEYASLDDGIATVDRSSGQLSGISPGNTTILSTV 1209


>ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
            sativus]
          Length = 1758

 Score =  228 bits (582), Expect = 6e-58
 Identities = 111/213 (52%), Positives = 153/213 (71%)
 Frame = -3

Query: 654  PAHGCSQLMLAPKSLGTALVTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSF 475
            P   C +L L+PK LGTALVTV+DIGL PPL++S+ V V ++DWIKI + E IS+ E S 
Sbjct: 989  PGMQCLELALSPKGLGTALVTVYDIGLNPPLSSSAVVHVADVDWIKISSQEEISLLEESS 1048

Query: 474  QSINFSVGVADGRTFDPSQYKYMNIRVHVEENIVKVVEDYDFPIHTDGYVHGSKFSLRAT 295
            Q ++ + G++DG TFD SQ+ YM+I VH+E+ IV++V+  D  I   G V  S F ++A 
Sbjct: 1049 QVVDLAAGISDGSTFDSSQFAYMHILVHIEDQIVELVDTDDSRITGHGVVKASGFKIKAV 1108

Query: 294  RLGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSH 115
             LG TT+Y+S +Q SGREI+S+P+ +EVYA PR+HP  IFL+ GASY LTV GGP +G++
Sbjct: 1109 SLGTTTLYVSILQQSGREILSEPITIEVYALPRVHPHSIFLLPGASYTLTVEGGPTVGTY 1168

Query: 114  VQYSSLDGQTAQIHKFSGRLLAISPGNSTLVAT 16
            V+++SLD     +HK SG LLA+S G S + AT
Sbjct: 1169 VEFASLDNAIVNVHKSSGLLLAVSSGKSNISAT 1201


>ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
            210-like [Cucumis sativus]
          Length = 2257

 Score =  228 bits (582), Expect = 6e-58
 Identities = 111/213 (52%), Positives = 153/213 (71%)
 Frame = -3

Query: 654  PAHGCSQLMLAPKSLGTALVTVHDIGLIPPLAASSTVQVVEMDWIKILTGEHISVEEGSF 475
            P   C +L L+PK LGTALVTV+DIGL PPL++S+ V V ++DWIKI + E IS+ E S 
Sbjct: 989  PGMQCLELALSPKGLGTALVTVYDIGLNPPLSSSAVVHVADVDWIKISSQEEISLLEESS 1048

Query: 474  QSINFSVGVADGRTFDPSQYKYMNIRVHVEENIVKVVEDYDFPIHTDGYVHGSKFSLRAT 295
            Q ++ + G++DG TFD SQ+ YM+I VH+E+ IV++V+  D  I   G V  S F ++A 
Sbjct: 1049 QVVDLAAGISDGSTFDSSQFAYMHILVHIEDQIVELVDTDDSRITGHGVVKASGFKIKAV 1108

Query: 294  RLGVTTIYLSAIQHSGREIMSQPVKVEVYAPPRIHPSDIFLVLGASYVLTVRGGPKIGSH 115
             LG TT+Y+S +Q SGREI+S+P+ +EVYA PR+HP  IFL+ GASY LTV GGP +G++
Sbjct: 1109 SLGTTTLYVSILQQSGREILSEPITIEVYALPRVHPHSIFLLPGASYTLTVEGGPTVGTY 1168

Query: 114  VQYSSLDGQTAQIHKFSGRLLAISPGNSTLVAT 16
            V+++SLD     +HK SG LLA+S G S + AT
Sbjct: 1169 VEFASLDNAIVNVHKSSGLLLAVSSGKSNISAT 1201


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