BLASTX nr result

ID: Scutellaria23_contig00029531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029531
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containi...   127   7e-28
ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   127   7e-28
ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   127   7e-28
ref|XP_002514751.1| pentatricopeptide repeat-containing protein,...   126   2e-27

>ref|XP_003525465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Glycine max]
          Length = 579

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/96 (65%), Positives = 82/96 (85%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 DTVAWNVLVSCYIRNKRSRDVLLLFDMMR-SSKECQPDDVTCLLVLQACGSLNALELGEK 111
           DTVAWNV++SC IRN R+RD L LFD+M+ SS +C+PDDVTCLL+LQAC  LNALE GE+
Sbjct: 169 DTVAWNVMISCCIRNNRTRDALSLFDVMQGSSYKCEPDDVTCLLLLQACAHLNALEFGER 228

Query: 110 VHNYLVKQGLHIAKNVCNTLIAMYSRCGCVEKAYEV 3
           +H Y++++G   A N+CN+LI+MYSRCGC++KAYEV
Sbjct: 229 IHGYIMERGYRDALNLCNSLISMYSRCGCLDKAYEV 264


>ref|XP_004155062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g47530-like [Cucumis sativus]
          Length = 602

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/96 (61%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 DTVAWNVLVSCYIRNKRSRDVLLLFDMMRSSKE-CQPDDVTCLLVLQACGSLNALELGEK 111
           D VAWNVL+SC  RNKR+RD L LF++M+S    CQPD VTCLL+LQAC  LNALE GE+
Sbjct: 192 DVVAWNVLISCLTRNKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGER 251

Query: 110 VHNYLVKQGLHIAKNVCNTLIAMYSRCGCVEKAYEV 3
           +H Y+ + G +   N+CN+LI+MYSRCG ++KAYEV
Sbjct: 252 IHGYIQQHGYNTESNLCNSLISMYSRCGRMDKAYEV 287


>ref|XP_003550784.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g47530-like [Glycine max]
          Length = 515

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/96 (61%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 DTVAWNVLVSCYIRNKRSRDVLLLFDMMR-SSKECQPDDVTCLLVLQACGSLNALELGEK 111
           DTVAWNV++SC IRN R+RD L LFD+++ SS +C+PDDVTCLL+LQAC  L ALE GE+
Sbjct: 104 DTVAWNVMISCCIRNNRTRDALSLFDVLQNSSYKCEPDDVTCLLLLQACAHLYALEFGER 163

Query: 110 VHNYLVKQGLHIAKNVCNTLIAMYSRCGCVEKAYEV 3
           +H Y+++ G   A N+ N LI+MYSRCGC++KA EV
Sbjct: 164 IHGYMMEHGYGGALNLSNALISMYSRCGCLDKAXEV 199


>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/96 (61%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 DTVAWNVLVSCYIRNKRSRDVLLLFDMMRSSK-ECQPDDVTCLLVLQACGSLNALELGEK 111
           DT+AWNVL+SCY+RN+R+RDVL++FD M S +  C+PDDVTCLL+LQAC +L ALE GEK
Sbjct: 89  DTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACANLGALEFGEK 148

Query: 110 VHNYLVKQGLHIAKNVCNTLIAMYSRCGCVEKAYEV 3
           VH ++V++G   A N+CN+LIAMYS+ G ++KA+ V
Sbjct: 149 VHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGV 184


>ref|XP_002514751.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546355|gb|EEF47857.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 335

 Score =  126 bits (317), Expect = 2e-27
 Identities = 61/96 (63%), Positives = 75/96 (78%), Gaps = 1/96 (1%)
 Frame = -1

Query: 287 DTVAWNVLVSCYIRNKRSRDVLLLFDMMRSSK-ECQPDDVTCLLVLQACGSLNALELGEK 111
           DTVAWNVL+SC+IRN+R+RDVL LFD M S +  C+PDDVTCLL++QAC +L ALE GEK
Sbjct: 95  DTVAWNVLISCFIRNQRTRDVLGLFDDMVSGEFGCEPDDVTCLLLVQACSNLGALEFGEK 154

Query: 110 VHNYLVKQGLHIAKNVCNTLIAMYSRCGCVEKAYEV 3
           VH Y+         N+CN+LI MYSRCGC++KAY V
Sbjct: 155 VHLYIQGHRYGDKTNLCNSLITMYSRCGCLDKAYGV 190


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