BLASTX nr result

ID: Scutellaria23_contig00029513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029513
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]   147   9e-34
ref|XP_002870941.1| pentatricopeptide repeat-containing protein ...   137   9e-31
ref|NP_195731.1| pentatricopeptide repeat-containing protein [Ar...   130   1e-28
ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   120   1e-25

>ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
 Frame = -3

Query: 451 LWSLKRG-LSINTHLVYQLNPSTYSQVLYECRHDLRSGQNFIDFIALKCPNFKXXXXXXX 275
           L +LK+G L+   +L+++L+      VLY+CR +L+ GQ FID I   CPNFK       
Sbjct: 77  LLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFS 136

Query: 274 XXXXXXVRSKRISDAQALILRMIRRSGASRAEIVESMLVAYEKFGSSLYVFDLFVRTFVQ 95
                 VRS+R+ DAQA+ILRM+R+SG SR EIVES+++ Y   GS+  VFDL VRT+VQ
Sbjct: 137 AMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQ 196

Query: 94  ARKFNEAVEVFRLLKFKNICVSINACNSVLG 2
           ARK  E  E FR+LK K +CVSINACNS+LG
Sbjct: 197 ARKLREGCEAFRVLKSKGLCVSINACNSLLG 227


>emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  147 bits (371), Expect = 9e-34
 Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
 Frame = -3

Query: 451 LWSLKRG-LSINTHLVYQLNPSTYSQVLYECRHDLRSGQNFIDFIALKCPNFKXXXXXXX 275
           L +LK+G L+   +L+++L+      VLY+CR +L+ GQ FID I   CPNFK       
Sbjct: 181 LLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQLGQRFIDSITSNCPNFKHSLQSFS 240

Query: 274 XXXXXXVRSKRISDAQALILRMIRRSGASRAEIVESMLVAYEKFGSSLYVFDLFVRTFVQ 95
                 VRS+R+ DAQA+ILRM+R+SG SR EIVES+++ Y   GS+  VFDL VRT+VQ
Sbjct: 241 AMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQ 300

Query: 94  ARKFNEAVEVFRLLKFKNICVSINACNSVLG 2
           ARK  E  E FR+LK K +CVSINACNS+LG
Sbjct: 301 ARKLREGCEAFRVLKSKGLCVSINACNSLLG 331


>ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297316778|gb|EFH47200.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 719

 Score =  137 bits (345), Expect = 9e-31
 Identities = 76/150 (50%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 WSLKRGLS-INTHLVYQLNPSTYSQVLYECRHDLRSGQNFIDFIALKCPNFKXXXXXXXX 272
           +SLK+G S +  HL+ +LNP    +VLY CR+DL  GQ F+D +    PNFK        
Sbjct: 50  FSLKQGNSNVRNHLI-RLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSLSA 108

Query: 271 XXXXXVRSKRISDAQALILRMIRRSGASRAEIVESMLVAYEKFGSSLYVFDLFVRTFVQA 92
                VRS R+SDAQ+ +LRMIRRSG SR EIV S++  Y   GS+  VFDL +RTFVQA
Sbjct: 109 MIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQA 168

Query: 91  RKFNEAVEVFRLLKFKNICVSINACNSVLG 2
           RK  EA E F LL+ K   VSI+ACN+++G
Sbjct: 169 RKLREAYEAFTLLRSKGYTVSIDACNALIG 198


>ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g01110 gi|6759434|emb|CAB69839.1| putative protein
           [Arabidopsis thaliana] gi|28973740|gb|AAO64186.1|
           unknown protein [Arabidopsis thaliana]
           gi|110736884|dbj|BAF00399.1| hypothetical protein
           [Arabidopsis thaliana] gi|332002917|gb|AED90300.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 729

 Score =  130 bits (326), Expect = 1e-28
 Identities = 73/150 (48%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
 Frame = -3

Query: 448 WSLKRGLS-INTHLVYQLNPSTYSQVLYECRHDLRSGQNFIDFIALKCPNFKXXXXXXXX 272
           +SLK+G + +  HL+ +LNP    +VLY CR+DL  GQ F+D +    PNFK        
Sbjct: 60  FSLKQGNNNVRNHLI-RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSA 118

Query: 271 XXXXXVRSKRISDAQALILRMIRRSGASRAEIVESMLVAYEKFGSSLYVFDLFVRTFVQA 92
                VRS R+SDAQ+ +LRMIRRSG SR EIV S+   +   GS+  VFDL +RT+VQA
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQA 178

Query: 91  RKFNEAVEVFRLLKFKNICVSINACNSVLG 2
           RK  EA E F LL+ K   VSI+ACN+++G
Sbjct: 179 RKLREAHEAFTLLRSKGFTVSIDACNALIG 208


>ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  120 bits (301), Expect = 1e-25
 Identities = 67/151 (44%), Positives = 95/151 (62%), Gaps = 1/151 (0%)
 Frame = -3

Query: 451 LWSLKRG-LSINTHLVYQLNPSTYSQVLYECRHDLRSGQNFIDFIALKCPNFKXXXXXXX 275
           L++LK+  +S     + +L+PS   QVL+ CR DL  G  FI  ++   PNFK       
Sbjct: 80  LFTLKQNNVSYLRDSLLRLSPSLLLQVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSLS 139

Query: 274 XXXXXXVRSKRISDAQALILRMIRRSGASRAEIVESMLVAYEKFGSSLYVFDLFVRTFVQ 95
                 VR +R+S+AQA ILRM+R+SG SR ++VES++     FGS   ++DL VRT+VQ
Sbjct: 140 AMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQ 199

Query: 94  ARKFNEAVEVFRLLKFKNICVSINACNSVLG 2
           A+K  E  E F++L+ K + VSINACN +LG
Sbjct: 200 AKKLREGSEAFQILRRKGVSVSINACNKLLG 230


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