BLASTX nr result

ID: Scutellaria23_contig00029492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029492
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256...    67   1e-10
gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]          64   3e-10
gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]          64   3e-10
ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|2...    62   2e-09
ref|XP_002523537.1| structural constituent of ribosome, putative...    59   1e-08

>ref|XP_002264271.1| PREDICTED: uncharacterized protein LOC100256785 [Vitis vinifera]
          Length = 162

 Score = 66.6 bits (161), Expect(2) = 1e-10
 Identities = 29/36 (80%), Positives = 35/36 (97%)
 Frame = +1

Query: 346 CMLLLKPNVSKEGIMDLVSRLGKHVYRRNGVLTDVK 453
           CMLLLKP+V+KE +MDLV+R+GKHVYRRNGVLTD+K
Sbjct: 6   CMLLLKPHVNKESLMDLVARVGKHVYRRNGVLTDIK 41



 Score = 24.3 bits (51), Expect(2) = 1e-10
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 239 MPLYDCMLLL 268
           MP YDCMLLL
Sbjct: 1   MPFYDCMLLL 10


>gb|ADR71238.1| 30S ribosomal protein S6B [Hevea brasiliensis]
          Length = 163

 Score = 63.9 bits (154), Expect(2) = 3e-10
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 346 CMLLLKPNVSKEGIMDLVSRLGKHVYRRNGVLTDVKXXXXXXXXXXXXGTIQL 504
           CMLLLKP+V KE +MDLV+R+GKHVY RNGVLTD+K            GTIQL
Sbjct: 6   CMLLLKPHVRKEALMDLVARVGKHVYARNGVLTDIK----------SFGTIQL 48



 Score = 25.8 bits (55), Expect(2) = 3e-10
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 239 MPLYDCMLLL 268
           MPLYDCMLLL
Sbjct: 1   MPLYDCMLLL 10


>gb|ADR71237.1| 30S ribosomal protein S6A [Hevea brasiliensis]
          Length = 163

 Score = 63.5 bits (153), Expect(2) = 3e-10
 Identities = 33/53 (62%), Positives = 38/53 (71%)
 Frame = +1

Query: 346 CMLLLKPNVSKEGIMDLVSRLGKHVYRRNGVLTDVKXXXXXXXXXXXXGTIQL 504
           CMLLLKP+V KE +MDLV+R+GKHVY RNGVLTD+K            GTIQL
Sbjct: 6   CMLLLKPHVRKEALMDLVARVGKHVYGRNGVLTDIK----------SFGTIQL 48



 Score = 25.8 bits (55), Expect(2) = 3e-10
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 239 MPLYDCMLLL 268
           MPLYDCMLLL
Sbjct: 1   MPLYDCMLLL 10


>ref|XP_002325157.1| predicted protein [Populus trichocarpa] gi|222866591|gb|EEF03722.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 61.6 bits (148), Expect(2) = 2e-09
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +1

Query: 346 CMLLLKPNVSKEGIMDLVSRLGKHVYRRNGVLTDVK 453
           CML+LKP+V KE +MDLV+R+GKHVY RNGV+TD+K
Sbjct: 6   CMLMLKPHVRKEALMDLVARVGKHVYSRNGVVTDIK 41



 Score = 25.0 bits (53), Expect(2) = 2e-09
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 239 MPLYDCMLLL 268
           MPLYDCML+L
Sbjct: 1   MPLYDCMLML 10


>ref|XP_002523537.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223537244|gb|EEF38876.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 162

 Score = 58.5 bits (140), Expect(2) = 1e-08
 Identities = 30/53 (56%), Positives = 37/53 (69%)
 Frame = +1

Query: 346 CMLLLKPNVSKEGIMDLVSRLGKHVYRRNGVLTDVKXXXXXXXXXXXXGTIQL 504
           CMLLLKP++ KE ++DLV+R+GKHV  RNGVLTD+K            GTIQL
Sbjct: 6   CMLLLKPHIHKEAVIDLVARVGKHVQSRNGVLTDMK----------SFGTIQL 48



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +2

Query: 239 MPLYDCMLLL 268
           MPLYDCMLLL
Sbjct: 1   MPLYDCMLLL 10


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