BLASTX nr result

ID: Scutellaria23_contig00029344 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029344
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]    70   2e-10
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]          69   4e-10
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    69   5e-10
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...    69   5e-10
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    69   5e-10

>emb|CAN71688.1| hypothetical protein VITISV_015290 [Vitis vinifera]
          Length = 259

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/67 (49%), Positives = 46/67 (68%)
 Frame = -2

Query: 201 EIHPPNRYEQADFVYYALNVAQDIKYEEPRDYKTAIKSKDCNK*IQAMNEELLSLEKNQT 22
           +I PP RY   D V YA +VA++I+ EEP+ Y   I +++  + I  MNEE+ SL+KN T
Sbjct: 164 QIKPPQRYSYVDSVAYAFSVAKNIEKEEPQTYHETITNRESTQWIITMNEEIESLQKNLT 223

Query: 21  WQLVDKP 1
           WQLV+KP
Sbjct: 224 WQLVEKP 230


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
 Frame = -2

Query: 192 PPNRY-EQADFVYYALNVAQDIKYE-EPRDYKTAIKSKDCNK*IQAMNEELLSLEKNQTW 19
           PP RY E+A+ V YAL+VA+DI+   EP  Y  AI S DCN+ I AM++E+ SLEKN TW
Sbjct: 571 PPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNHTW 630

Query: 18  QLVDKP 1
           +LV  P
Sbjct: 631 ELVKLP 636


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -2

Query: 198  IHPPNRY-EQADFVYYALNVAQDIKYE-EPRDYKTAIKSKDCNK*IQAMNEELLSLEKNQ 25
            I PP RY E+A+ V YAL+VA++I+   EP  Y  AI S DCN+ I AM++E+ SLEKN 
Sbjct: 994  IKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHDEMESLEKNH 1053

Query: 24   TWQLVDKP 1
            TW+LV  P
Sbjct: 1054 TWELVKLP 1061


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -2

Query: 198 IHPPNRY-EQADFVYYALNVAQDIKYE-EPRDYKTAIKSKDCNK*IQAMNEELLSLEKNQ 25
           I PP RY E+A+ V YAL+VA++I+   EP  Y  AI S DCN+ I AM++E+ SLEKN 
Sbjct: 748 IKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMHDEMESLEKNH 807

Query: 24  TWQLVDKP 1
           TW+LV  P
Sbjct: 808 TWELVKLP 815


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
 Frame = -2

Query: 198 IHPPNRY-EQADFVYYALNVAQDIKYE-EPRDYKTAIKSKDCNK*IQAMNEELLSLEKNQ 25
           I PP RY E+A+ V YAL+VA++I+   EP  Y  AI S DCN+ I AM++E+ SLEKN 
Sbjct: 785 IKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMHDEMESLEKNH 844

Query: 24  TWQLVDKP 1
           TW+LV  P
Sbjct: 845 TWELVKLP 852


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