BLASTX nr result

ID: Scutellaria23_contig00029195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029195
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group] g...    96   2e-18
ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containi...    96   3e-18
ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea ma...    88   6e-16
ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea ma...    88   6e-16
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...    84   9e-15

>ref|NP_001045991.1| Os02g0164600 [Oryza sativa Japonica Group]
           gi|49388051|dbj|BAD25165.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|49388408|dbj|BAD25541.1| putative
           pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group] gi|113535522|dbj|BAF07905.1|
           Os02g0164600 [Oryza sativa Japonica Group]
           gi|125538213|gb|EAY84608.1| hypothetical protein
           OsI_05976 [Oryza sativa Indica Group]
           gi|125580926|gb|EAZ21857.1| hypothetical protein
           OsJ_05503 [Oryza sativa Japonica Group]
           gi|215737275|dbj|BAG96204.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 476

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 42/79 (53%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
 Frame = -2

Query: 234 RIQPDLRHYGCVVDLLGRAGMIERAYSIVENMAMEPNLAVLGSLLSSCRLHNELEIGKAV 55
           ++ PD++HYGC+VDL  RAG+I R Y  +E+M  EPNLA+LG+LLS+C ++NEL+IG+ V
Sbjct: 355 KVTPDIKHYGCMVDLFSRAGLIARGYQFIESMPFEPNLAILGALLSACSINNELDIGELV 414

Query: 54  LAKIELLK-EQGGTSVLLS 1
           + +IE ++ ++GG  VLLS
Sbjct: 415 IKRIESVRSDKGGAGVLLS 433


>ref|XP_003570973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Brachypodium distachyon]
          Length = 472

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/79 (53%), Positives = 64/79 (81%), Gaps = 1/79 (1%)
 Frame = -2

Query: 234 RIQPDLRHYGCVVDLLGRAGMIERAYSIVENMAMEPNLAVLGSLLSSCRLHNELEIGKAV 55
           ++ PD++HYGC+VDL  RAG++ RA+ ++++M  +PNLA+LG+LLS+C ++NELEIG+ V
Sbjct: 354 KVTPDIKHYGCMVDLFSRAGLLSRAFQLIDSMPFDPNLAILGALLSACSINNELEIGELV 413

Query: 54  LAKIE-LLKEQGGTSVLLS 1
           L KIE +   +GG +VLLS
Sbjct: 414 LKKIESVCSYKGGANVLLS 432


>ref|NP_001183615.1| uncharacterized protein LOC100502209 [Zea mays]
           gi|238013452|gb|ACR37761.1| unknown [Zea mays]
           gi|413926458|gb|AFW66390.1| hypothetical protein
           ZEAMMB73_680096 [Zea mays] gi|413926459|gb|AFW66391.1|
           hypothetical protein ZEAMMB73_680096 [Zea mays]
          Length = 162

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 DLRHYGCVVDLLGRAGMIERAYSIVENMAMEPNLAVLGSLLSSCRLHNELEIGKAVLAKI 43
           D +HYGC+VDL  RAG++ RAY  +  M  EPNL +LG+LLS+C ++NELEIG+ VL KI
Sbjct: 45  DTKHYGCMVDLFSRAGLVRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKI 104

Query: 42  ELL-KEQGGTSVLLS 1
           +++   +GG  VLLS
Sbjct: 105 DMVCSYKGGAGVLLS 119


>ref|NP_001132129.1| uncharacterized protein LOC100193546 [Zea mays]
           gi|194693506|gb|ACF80837.1| unknown [Zea mays]
           gi|413926460|gb|AFW66392.1| hypothetical protein
           ZEAMMB73_680096 [Zea mays]
          Length = 473

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/75 (54%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222 DLRHYGCVVDLLGRAGMIERAYSIVENMAMEPNLAVLGSLLSSCRLHNELEIGKAVLAKI 43
           D +HYGC+VDL  RAG++ RAY  +  M  EPNL +LG+LLS+C ++NELEIG+ VL KI
Sbjct: 356 DTKHYGCMVDLFSRAGLVRRAYEFISMMPFEPNLEILGALLSACSINNELEIGELVLNKI 415

Query: 42  ELL-KEQGGTSVLLS 1
           +++   +GG  VLLS
Sbjct: 416 DMVCSYKGGAGVLLS 430


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/78 (52%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -2

Query: 231 IQPDLRHYGCVVDLLGRAGMIERAYSIVENMAMEPNLAVLGSLLSSCRLHNELEIGK-AV 55
           I+P ++HYGC+VDLLGRAG++E A  +V  M MEP+  VLG+LL+SCR+H ++E+GK  V
Sbjct: 373 IEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETV 432

Query: 54  LAKIELLKEQGGTSVLLS 1
            + +E   + GG  VLLS
Sbjct: 433 ESLVERGLDHGGVHVLLS 450


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