BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00029014
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...   157   1e-36
ref|NP_181268.1| pentatricopeptide repeat-containing protein [Ar...   149   2e-34
ref|XP_002881503.1| pentatricopeptide repeat-containing protein ...   147   7e-34
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32

>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score =  163 bits (412), Expect = 2e-38
 Identities = 75/128 (58%), Positives = 101/128 (78%)
 Frame = -1

Query: 385 CVLKAMSEVALDGPVLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMP 206
           CVLKA+S +  D  +LA+ + C+V++ G D ++FV N  +TYYSRC +   AR LFD M 
Sbjct: 143 CVLKALSVLFPDS-ILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMH 201

Query: 205 ERDMVSWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSDLVLGM 26
           +RD+VSWNSMI+GYSQGGFY +CK LYR+MLD  GLRP+GVT +SV+QACAQ++DLV GM
Sbjct: 202 DRDIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGM 261

Query: 25  AVHKYVID 2
            VH+++I+
Sbjct: 262 KVHQFIIE 269



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 30/143 (20%)
 Frame = -1

Query: 343 VLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGY 164
           V    +H ++I+  ++++V   N  +  Y++CG +  AR LF+EM  +D V++ S++SGY
Sbjct: 258 VFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGY 317

Query: 163 SQGGFYVECKNLYRRM------------------------------LDLGGLRPDGVTAI 74
              GF  +  +L+R M                              +   G RP+ VT  
Sbjct: 318 MTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLS 377

Query: 73  SVMQACAQSSDLVLGMAVHKYVI 5
           S++   +  S+L  G A+H Y I
Sbjct: 378 SILPTFSCFSNLKGGKAIHAYAI 400



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/96 (33%), Positives = 52/96 (54%)
 Frame = -1

Query: 334 RMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQG 155
           + IH Y I+ G   N++V    +  Y++ G +  A+ +FD+  +R ++ W ++IS YS  
Sbjct: 393 KAIHAYAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAH 452

Query: 154 GFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQS 47
           G       L+  ML   G +PD VT  +V+ ACA S
Sbjct: 453 GDANAALRLFGDMLS-NGTQPDPVTFTAVLAACAHS 487



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
 Frame = -1

Query: 337 ARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQ 158
           A+ +H  ++   L  + F+ +  +T+YS+   +  A  +FD++ ++++ SWN+M+ GYS 
Sbjct: 53  AKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSI 112

Query: 157 GGFYVECKNLYRRMLDLGG--LRPDGVTAISVMQACA-QSSDLVLGMAVHKYVI 5
              +V   NL   +L      L+PD  T   V++A +    D +L   V  +V+
Sbjct: 113 HNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVL 166


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  157 bits (396), Expect = 1e-36
 Identities = 68/128 (53%), Positives = 93/128 (72%)
 Frame = -1

Query: 385 CVLKAMSEVALDGPVLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMP 206
           C+LK++S   L    L + +H +V++ G D +VFV N  +TYYS+C D+  +R +FD M 
Sbjct: 129 CLLKSLSSFTLSDVKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMT 188

Query: 205 ERDMVSWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSDLVLGM 26
           +RD+VSWNSMISGYSQGG Y +CK LYR M+D  G RP+GVT +SV+QAC Q+ DL  GM
Sbjct: 189 KRDVVSWNSMISGYSQGGLYEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGM 248

Query: 25  AVHKYVID 2
            VHK+++D
Sbjct: 249 EVHKFIVD 256



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 52/92 (56%)
 Frame = -1

Query: 328 IHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQGGF 149
           IH Y IK+G   N++V    +  Y++ G +  A+ +FD+  +R +V W ++IS Y+  G 
Sbjct: 382 IHSYAIKIGYHRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGD 441

Query: 148 YVECKNLYRRMLDLGGLRPDGVTAISVMQACA 53
                 L+  ML   G++PD VT  +V+ ACA
Sbjct: 442 ANLALGLFHEMLK-QGIQPDPVTFTAVLAACA 472


>ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g37310 gi|4056485|gb|AAC98051.1| hypothetical protein
           [Arabidopsis thaliana] gi|110741249|dbj|BAF02175.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330254288|gb|AEC09382.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/131 (55%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
 Frame = -1

Query: 385 CVLKAMS---EVALDGPVLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFD 215
           CVLKA+S   +  L    LAR +H +VI+ G D +VFVGNG +TYY++C ++ SAR +FD
Sbjct: 134 CVLKALSGCDDFWLGS--LARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFD 191

Query: 214 EMPERDMVSWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSDLV 35
           EM ERD+VSWNSMISGYSQ G + +CK +Y+ ML     +P+GVT ISV QAC QSSDL+
Sbjct: 192 EMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI 251

Query: 34  LGMAVHKYVID 2
            G+ VHK +I+
Sbjct: 252 FGLEVHKKMIE 262



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 31/139 (22%)
 Frame = -1

Query: 328 IHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMV-------------- 191
           +H  +I+  + +++ + N  + +Y++CG +  ARALFDEM E+D V              
Sbjct: 256 VHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGL 315

Query: 190 -----------------SWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQ 62
                            +WN+MISG  Q   + E  N +R M+  G  RP+ VT  S++ 
Sbjct: 316 VKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGS-RPNTVTLSSLLP 374

Query: 61  ACAQSSDLVLGMAVHKYVI 5
           +   SS+L  G  +H + I
Sbjct: 375 SLTYSSNLKGGKEIHAFAI 393



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/96 (31%), Positives = 55/96 (57%)
 Frame = -1

Query: 328 IHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQGGF 149
           IH + I+ G D N++V    +  Y++ G ++ A+ +FD   +R +++W ++I+ Y+  G 
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGD 447

Query: 148 YVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSD 41
                +L+ +M  L G +PD VT  +V+ A A S D
Sbjct: 448 SDSACSLFDQMQCL-GTKPDDVTLTAVLSAFAHSGD 482


>ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327342|gb|EFH57762.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 669

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/131 (56%), Positives = 96/131 (73%), Gaps = 3/131 (2%)
 Frame = -1

Query: 385 CVLKAMS---EVALDGPVLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFD 215
           CVLKA+S   +  L    LAR +H +VI+ G D +VFVGNG +TYY++C ++ SAR +FD
Sbjct: 134 CVLKALSGCDDFWLGS--LARQVHGFVIRGGSDSDVFVGNGLITYYTKCDNIESARKVFD 191

Query: 214 EMPERDMVSWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSDLV 35
           EM +RD+VSWNSMISGYSQ G + +CK LY+ ML     +P+ VT ISV+QAC QSSDLV
Sbjct: 192 EMSDRDVVSWNSMISGYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLV 251

Query: 34  LGMAVHKYVID 2
            GM VHK +I+
Sbjct: 252 FGMEVHKKMIE 262



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 30/143 (20%)
 Frame = -1

Query: 343 VLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGY 164
           V    +H  +I+  + +++ + N  + +Y++CG +  ARALFDEM E+D V++ ++ISGY
Sbjct: 251 VFGMEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGY 310

Query: 163 SQGGFYVECKNLYRRMLDLG------------------------------GLRPDGVTAI 74
              G   E   L+  M  +G                              G RP+ VT  
Sbjct: 311 MAHGLVKEAMALFSEMESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGSRPNTVTLS 370

Query: 73  SVMQACAQSSDLVLGMAVHKYVI 5
           S++ +   SS+L  G  +H + I
Sbjct: 371 SLLPSLTYSSNLKGGKEIHAFAI 393



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/96 (31%), Positives = 54/96 (56%)
 Frame = -1

Query: 328 IHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQGGF 149
           IH + I+ G D N++V    +  Y++ G ++ A+ +FD   +R ++ W ++I+ Y+  G 
Sbjct: 388 IHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGD 447

Query: 148 YVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSD 41
                +L+ +M  L G +PD VT  +V+ A A S D
Sbjct: 448 SDSACSLFDQMQCL-GTKPDNVTLTAVLSAFAHSGD 482


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/129 (52%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
 Frame = -1

Query: 385 CVLKAMSEVALDGPV-LARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEM 209
           C+LK++S + +   V L + IHC+V++ GL  +VFV N  +++YS+C  V  AR LFD+M
Sbjct: 126 CLLKSLSSLLMVTDVCLGKEIHCFVLRRGLVEDVFVENALISFYSKCLGVGFARKLFDKM 185

Query: 208 PERDMVSWNSMISGYSQGGFYVECKNLYRRMLDLGGLRPDGVTAISVMQACAQSSDLVLG 29
            ERD+V+WNSMI+GY+Q GF+ ECK LYR M  L G +P+ VT +SV+QAC QS DLV G
Sbjct: 186 RERDVVTWNSMIAGYAQAGFFKECKELYREMGALPGFKPNAVTVLSVLQACMQSQDLVFG 245

Query: 28  MAVHKYVID 2
           M VH+Y++D
Sbjct: 246 MEVHRYIVD 254



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 30/143 (20%)
 Frame = -1

Query: 343 VLARMIHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGY 164
           V    +H Y++   ++L+V V N  +  Y++CG +  AR LFDEM E+D V++ ++ISGY
Sbjct: 243 VFGMEVHRYIVDNKVELDVLVCNALIGLYAKCGSLDYARELFDEMSEKDEVTYGAIISGY 302

Query: 163 SQGGFYVECKNLYRRM------------------------LDLG------GLRPDGVTAI 74
              G   +   L+R M                        +DL       G RP+ VT  
Sbjct: 303 MAHGVVDKGMELFREMKSRVLSTWNAVISGLVQNNRHEGVVDLVREMQGLGFRPNAVTLS 362

Query: 73  SVMQACAQSSDLVLGMAVHKYVI 5
           SV+   +  S+L  G  +H Y +
Sbjct: 363 SVLPTLSYFSNLKGGKEIHGYAV 385



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/92 (32%), Positives = 51/92 (55%)
 Frame = -1

Query: 328 IHCYVIKVGLDLNVFVGNGFVTYYSRCGDVVSARALFDEMPERDMVSWNSMISGYSQGGF 149
           IH Y +K G D N++V    +  Y++ G +  A+ +FD+  ER ++ W ++IS ++  G 
Sbjct: 380 IHGYAVKNGYDRNIYVATAIIDTYAKLGFLFGAQYVFDQSKERSLIIWTAIISAHAAHGD 439

Query: 148 YVECKNLYRRMLDLGGLRPDGVTAISVMQACA 53
                  +  ML   G++PD VT  +V+ ACA
Sbjct: 440 ANSALTFFDEMLS-NGIQPDHVTFTAVLAACA 470