BLASTX nr result

ID: Scutellaria23_contig00028990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028990
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521806.1| Disease resistance protein RPM1, putative [R...    62   6e-08
gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Popu...    60   1e-07
ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trich...    60   1e-07
ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichoca...    60   2e-07
ref|XP_002334517.1| nbs-lrr resistance protein [Populus trichoca...    59   3e-07

>ref|XP_002521806.1| Disease resistance protein RPM1, putative [Ricinus communis]
           gi|223539019|gb|EEF40616.1| Disease resistance protein
           RPM1, putative [Ricinus communis]
          Length = 943

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = +1

Query: 124 VGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITIG 303
           VG+    ++L+ WLV D S+ +VVS+VGM G+GKTTL   VYYD  V   F+F  +IT+ 
Sbjct: 166 VGIERPKMKLIEWLVEDKSEREVVSVVGMGGLGKTTLVTKVYYDKEVKKRFEFRAWITLS 225

Query: 304 RS 309
           +S
Sbjct: 226 QS 227


>gb|ABF81446.1| NBS-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1997

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +1

Query: 121 MVGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITI 300
           +VG+      L+GWLV   S+ +V+S+VGM G+GKTTL + VY+D+ V  +F+F ++IT+
Sbjct: 163 IVGIEKPKKLLIGWLVRGRSEREVISVVGMGGLGKTTLVRKVYHDADVKKHFQFRVWITL 222

Query: 301 GRS 309
             S
Sbjct: 223 SPS 225



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 121  MVGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITI 300
            +VG+     QL+ WL+   S  +V+S+VGM G+GK+TL K VY DS V  +FKF  +IT+
Sbjct: 1168 LVGIEKPKKQLIEWLLGSKSGREVISVVGMGGLGKSTLVKKVYDDSDVKKHFKFRAWITV 1227

Query: 301  GRS 309
             +S
Sbjct: 1228 SQS 1230


>ref|XP_002326568.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|105922919|gb|ABF81444.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222833890|gb|EEE72367.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 974

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/63 (44%), Positives = 44/63 (69%)
 Frame = +1

Query: 121 MVGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITI 300
           +VG+      L+GWLV   S+ +V+S+VGM G+GKTTL + VY+D+ V  +F+F ++IT+
Sbjct: 163 IVGIEKPKKLLIGWLVRGRSEREVISVVGMGGLGKTTLVRKVYHDADVKKHFQFRVWITL 222

Query: 301 GRS 309
             S
Sbjct: 223 SPS 225


>ref|XP_002326566.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222833888|gb|EEE72365.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 916

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = +1

Query: 121 MVGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITI 300
           +VG+ +   +L+GWLV   S  +VVS+ GM G+GKTTLAK VY D+ V  +F    +IT+
Sbjct: 165 LVGIEERKSKLVGWLVDGRSGREVVSLAGMGGLGKTTLAKQVYDDAEVKKHFSVHAWITV 224

Query: 301 GRS 309
            RS
Sbjct: 225 SRS 227


>ref|XP_002334517.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222872779|gb|EEF09910.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 948

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/63 (46%), Positives = 42/63 (66%)
 Frame = +1

Query: 121 MVGVVDELLQLLGWLVLDSSKLDVVSIVGMAGIGKTTLAKDVYYDSFVLDYFKFGLFITI 300
           +VG+     QL+ WL+   S  +V+S+VGM G+GK+TL K VY DS V  +FKF  +IT+
Sbjct: 165 LVGIEKPKKQLIEWLLGSKSGREVISVVGMGGLGKSTLVKKVYDDSDVKKHFKFRAWITV 224

Query: 301 GRS 309
            +S
Sbjct: 225 SQS 227


Top