BLASTX nr result

ID: Scutellaria23_contig00028708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028708
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18266.3| unnamed protein product [Vitis vinifera]              186   2e-45
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   175   3e-42
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   168   4e-40
ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l...   160   1e-37
gb|AFW65430.1| hypothetical protein ZEAMMB73_814845, partial [Ze...   137   7e-31

>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  186 bits (471), Expect = 2e-45
 Identities = 85/120 (70%), Positives = 102/120 (85%), Gaps = 9/120 (7%)
 Frame = -3

Query: 343 IEVDLVICFDANVSPLRMIQRMGRTGRKHEGRV---------VVLACEGPELKGYMRKQA 191
           +EVDLVICFDAN+SPLRMIQRMGRTGRKH+GRV         +VLACEG E+KGYMRKQA
Sbjct: 604 MEVDLVICFDANISPLRMIQRMGRTGRKHDGRVDILLSFMLLLVLACEGSEMKGYMRKQA 663

Query: 190 NSKSIKKHMINGGMNSFNFHPSPRMVPHVYKPEVQFLEMSIEEYVPRGKMGKSSEPVSLP 11
           NSK+++KHM NGGMNSFNFH SPRM+PH++KPEVQF+E+SIE++VPRG+ GK   P+  P
Sbjct: 664 NSKTVRKHMRNGGMNSFNFHSSPRMIPHIFKPEVQFVELSIEQFVPRGRKGKDDHPIQAP 723


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
           thaliana]
          Length = 1344

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/114 (72%), Positives = 95/114 (83%)
 Frame = -3

Query: 343 IEVDLVICFDANVSPLRMIQRMGRTGRKHEGRVVVLACEGPELKGYMRKQANSKSIKKHM 164
           +EVDLVICFDANVSPLRMIQRMGRTGRK+ GRVVVLACEG E   YMRKQA+ ++IKKHM
Sbjct: 546 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGRVVVLACEGSEKNSYMRKQASGRAIKKHM 605

Query: 163 INGGMNSFNFHPSPRMVPHVYKPEVQFLEMSIEEYVPRGKMGKSSEPVSLPAFK 2
            NGG NSFNFHPSPRM+PHVYKPEVQ +E SI+++VPRGK  +       PAF+
Sbjct: 606 RNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQ 659


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193686|gb|AEE31807.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1390

 Score =  168 bits (426), Expect = 4e-40
 Identities = 81/115 (70%), Positives = 95/115 (82%), Gaps = 1/115 (0%)
 Frame = -3

Query: 343 IEVDLVICFDANVSPLRMIQRMGRTGRKHEGR-VVVLACEGPELKGYMRKQANSKSIKKH 167
           +EVDLVICFDANVSPLRMIQRMGRTGRK+ GR ++VLACEG E   YMRKQA+ ++IKKH
Sbjct: 544 MEVDLVICFDANVSPLRMIQRMGRTGRKNNGRPLLVLACEGSEKNSYMRKQASGRAIKKH 603

Query: 166 MINGGMNSFNFHPSPRMVPHVYKPEVQFLEMSIEEYVPRGKMGKSSEPVSLPAFK 2
           M NGG NSFNFHPSPRM+PHVYKPEVQ +E SI+++VPRGK  +       PAF+
Sbjct: 604 MRNGGTNSFNFHPSPRMIPHVYKPEVQHVEFSIKQFVPRGKKLQEEYATETPAFQ 658


>ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
          Length = 1262

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/107 (71%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = -3

Query: 343 IEVDLVICFDANVSPLRMIQRMGRTGRKHEGR-VVVLACEGPELKGYMRKQANSKSIKKH 167
           +EVDLVI FDAN+SPLRMIQRMGRTGRKH+GR ++V ACEG ELKGY++KQA SK+I KH
Sbjct: 528 MEVDLVISFDANISPLRMIQRMGRTGRKHDGRSLLVFACEGTELKGYLQKQAKSKTISKH 587

Query: 166 MINGGMNSFNFHPSPRMVPHVYKPEVQFLEMSIEEYVPRGKMGKSSE 26
           M NGG+NSF FHPSPRM+PHV KPEV+ +E+SIE+++PR K  K  E
Sbjct: 588 MRNGGINSFTFHPSPRMIPHVLKPEVKCVELSIEKFIPRPKNVKDDE 634


>gb|AFW65430.1| hypothetical protein ZEAMMB73_814845, partial [Zea mays]
          Length = 803

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/100 (65%), Positives = 84/100 (84%)
 Frame = -3

Query: 343 IEVDLVICFDANVSPLRMIQRMGRTGRKHEGRVVVLACEGPELKGYMRKQANSKSIKKHM 164
           IEVDLVICFDANVSPLRMIQRMGRTGRK+EGRVVVLA EG EL+GY +KQ + ++++K +
Sbjct: 130 IEVDLVICFDANVSPLRMIQRMGRTGRKNEGRVVVLAYEGQELQGYRKKQGDCRTMRKLL 189

Query: 163 INGGMNSFNFHPSPRMVPHVYKPEVQFLEMSIEEYVPRGK 44
            N     F +H SPRMVPHVYKPEV++++++I++Y+P  K
Sbjct: 190 HNS--ERFEYHASPRMVPHVYKPEVKYVKLTIDKYIPHAK 227


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