BLASTX nr result

ID: Scutellaria23_contig00028663 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028663
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                               70   2e-10
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    66   3e-09
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    59   3e-07
emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]    56   3e-06
emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]    55   4e-06

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = +1

Query: 58   VGPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVV 237
            +GPV +P  ILA R   +G  ++EQ+LV+W     D+ATW D+E  +  +P FNL DKVV
Sbjct: 1437 MGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVV 1496

Query: 238  LKGEGVVRE--QDGERV 282
             KGEG V      GE+V
Sbjct: 1497 FKGEGNVTNGMSRGEKV 1513


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
 Frame = +1

Query: 61   GPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVL 240
            G V EPE +L  R     G +++Q+LV W GQ  ++ATW D    + QFP+F L DK +L
Sbjct: 1202 GVVIEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAML 1261

Query: 241  KGEGVVREQDGERVELVEQARTRP--LQVYHRR 333
             G  +VR  +     LV      P   QVY RR
Sbjct: 1262 SGGSIVRTAE----SLVHNTTVGPKVWQVYSRR 1290


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/88 (36%), Positives = 46/88 (52%)
 Frame = +1

Query: 4    VVGEHPIXXXXXXXXXXXVGPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLD 183
            VVG  P+           +  V EPE +L  R+  +G +   + L+KW G  A +ATW D
Sbjct: 1518 VVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWED 1577

Query: 184  VEPFQQQFPDFNLGDKVVLKGEGVVREQ 267
            + P   +FP F+L DKV + G G+V  Q
Sbjct: 1578 MSPIHLRFPSFHLEDKVNVWGAGIVMHQ 1605


>emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera]
          Length = 422

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +1

Query: 67  VFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVLKG 246
           V EPE IL  R   KG R  E+ LVKW     DDATW D +  Q +F + NL DKV ++ 
Sbjct: 342 VLEPEGILDTRSVKKGSRIFEESLVKWKRLPLDDATWEDTKMLQDRFINVNLEDKVPVQD 401

Query: 247 EGVVREQDGERV 282
            G+   +  +RV
Sbjct: 402 RGIDELRRSQRV 413


>emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
          Length = 1384

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/72 (41%), Positives = 41/72 (56%)
 Frame = +1

Query: 67   VFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVLKG 246
            V EPE IL  R   KG R  E+ LVKW     DDATW D +  + +F + NL DKV+++ 
Sbjct: 1304 VLEPEGILDTRWVKKGSRIFEESLVKWKRLPLDDATWEDTKMLRDRFINVNLEDKVLVQD 1363

Query: 247  EGVVREQDGERV 282
             G+   +  +RV
Sbjct: 1364 RGIDEPRRSQRV 1375


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