BLASTX nr result
ID: Scutellaria23_contig00028663
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Scutellaria23_contig00028663 (436 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAO23078.1| polyprotein [Glycine max] 70 2e-10 gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas... 66 3e-09 gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 59 3e-07 emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera] 56 3e-06 emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] 55 4e-06 >gb|AAO23078.1| polyprotein [Glycine max] Length = 1552 Score = 69.7 bits (169), Expect = 2e-10 Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +1 Query: 58 VGPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVV 237 +GPV +P ILA R +G ++EQ+LV+W D+ATW D+E + +P FNL DKVV Sbjct: 1437 MGPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVV 1496 Query: 238 LKGEGVVRE--QDGERV 282 KGEG V GE+V Sbjct: 1497 FKGEGNVTNGMSRGEKV 1513 >gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] Length = 1297 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/93 (39%), Positives = 49/93 (52%), Gaps = 2/93 (2%) Frame = +1 Query: 61 GPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVL 240 G V EPE +L R G +++Q+LV W GQ ++ATW D + QFP+F L DK +L Sbjct: 1202 GVVIEPETVLTRRTIQVQGEKIDQVLVHWMGQKVEEATWEDTLIIRSQFPNFYLEDKAML 1261 Query: 241 KGEGVVREQDGERVELVEQARTRP--LQVYHRR 333 G +VR + LV P QVY RR Sbjct: 1262 SGGSIVRTAE----SLVHNTTVGPKVWQVYSRR 1290 >gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris] Length = 1631 Score = 59.3 bits (142), Expect = 3e-07 Identities = 32/88 (36%), Positives = 46/88 (52%) Frame = +1 Query: 4 VVGEHPIXXXXXXXXXXXVGPVFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLD 183 VVG P+ + V EPE +L R+ +G + + L+KW G A +ATW D Sbjct: 1518 VVGNTPVLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGLPAFEATWED 1577 Query: 184 VEPFQQQFPDFNLGDKVVLKGEGVVREQ 267 + P +FP F+L DKV + G G+V Q Sbjct: 1578 MSPIHLRFPSFHLEDKVNVWGAGIVMHQ 1605 >emb|CAN75226.1| hypothetical protein VITISV_035857 [Vitis vinifera] Length = 422 Score = 56.2 bits (134), Expect = 3e-06 Identities = 31/72 (43%), Positives = 40/72 (55%) Frame = +1 Query: 67 VFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVLKG 246 V EPE IL R KG R E+ LVKW DDATW D + Q +F + NL DKV ++ Sbjct: 342 VLEPEGILDTRSVKKGSRIFEESLVKWKRLPLDDATWEDTKMLQDRFINVNLEDKVPVQD 401 Query: 247 EGVVREQDGERV 282 G+ + +RV Sbjct: 402 RGIDELRRSQRV 413 >emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera] Length = 1384 Score = 55.5 bits (132), Expect = 4e-06 Identities = 30/72 (41%), Positives = 41/72 (56%) Frame = +1 Query: 67 VFEPELILAGRKEHKGGREVEQMLVKWFGQSADDATWLDVEPFQQQFPDFNLGDKVVLKG 246 V EPE IL R KG R E+ LVKW DDATW D + + +F + NL DKV+++ Sbjct: 1304 VLEPEGILDTRWVKKGSRIFEESLVKWKRLPLDDATWEDTKMLRDRFINVNLEDKVLVQD 1363 Query: 247 EGVVREQDGERV 282 G+ + +RV Sbjct: 1364 RGIDEPRRSQRV 1375