BLASTX nr result

ID: Scutellaria23_contig00028661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028661
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   167   8e-40
ref|XP_002306264.1| chromatin remodeling complex subunit [Populu...   161   5e-38
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...   158   5e-37
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   157   7e-37
ref|XP_002516323.1| ATP binding protein, putative [Ricinus commu...   157   1e-36

>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score =  167 bits (423), Expect = 8e-40
 Identities = 86/106 (81%), Positives = 95/106 (89%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   EIVLSACDGSPLAAITILKKICDHPLLLTKRAAEDVLEGMDSTVGPEDHHVAEKLAMHIA 182
           EIVLSA DGSPLAA+TILKKICDHPLLLTKRAAED+LEGM+S + PED  VAEKLAMH+A
Sbjct: 677 EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDVAVAEKLAMHVA 736

Query: 183 DVAERYDIVENHD-ISCKISFILSLLGDLVPKGHNVLIFSQTRKML 317
           DVAER D  E HD ISCKISF+LSLL +L+P+GHNVLIFSQTRKML
Sbjct: 737 DVAERTDFQEKHDSISCKISFVLSLLDNLIPEGHNVLIFSQTRKML 782


>ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222855713|gb|EEE93260.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1058

 Score =  161 bits (408), Expect = 5e-38
 Identities = 86/108 (79%), Positives = 95/108 (87%), Gaps = 3/108 (2%)
 Frame = +3

Query: 3   EIVLSACDGSPLAAITILKKICDHPLLLTKRAAEDVLEGMDSTVGPEDHHVAEKLAMHIA 182
           EIVLSA DGSPLAA+TILKKICDHPLLLTKRAAED+LEGM+S + PED  VAEKLAMH+A
Sbjct: 647 EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLNPEDAAVAEKLAMHLA 706

Query: 183 DVAER--YDIVENHD-ISCKISFILSLLGDLVPKGHNVLIFSQTRKML 317
           DVA+R   D  E HD ISCKISFILSLL +L+P+GHNVLIFSQTRKML
Sbjct: 707 DVADRTDTDFQEKHDNISCKISFILSLLDNLIPEGHNVLIFSQTRKML 754


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/105 (75%), Positives = 92/105 (87%)
 Frame = +3

Query: 3   EIVLSACDGSPLAAITILKKICDHPLLLTKRAAEDVLEGMDSTVGPEDHHVAEKLAMHIA 182
           EIVLSA DGSPLAA+TILKKICDHPLLLTKRAAEDVL+G++S + PE+ +VAEKLAMHIA
Sbjct: 666 EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLDGLESMLKPEEVNVAEKLAMHIA 725

Query: 183 DVAERYDIVENHDISCKISFILSLLGDLVPKGHNVLIFSQTRKML 317
           DVAE     + HD+SCKI FI+SLL +L+P+GH VLIFSQTRKML
Sbjct: 726 DVAETDKFEDKHDVSCKIVFIMSLLDNLIPEGHRVLIFSQTRKML 770


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  157 bits (398), Expect = 7e-37
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +3

Query: 3   EIVLSACDGSPLAAITILKKICDHPLLLTKRAAEDVLEGMDSTVGPEDHHVAEKLAMHIA 182
           EIVLSA DGSPLAA+TILKKICDHPLLLTKRAAEDVLEGMDS + PE+ +VAEKLAMHIA
Sbjct: 607 EIVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMDSMLKPEEANVAEKLAMHIA 666

Query: 183 DVAERYDIVENHDISCKISFILSLLGDLVPKGHNVLIFSQTRKML 317
           DVA      +  D+SCKISFI+SLL +L+P+GH VLIFSQTRKML
Sbjct: 667 DVAGTDKFKDEQDVSCKISFIMSLLDNLIPEGHCVLIFSQTRKML 711


>ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
           gi|223544553|gb|EEF46070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1109

 Score =  157 bits (396), Expect = 1e-36
 Identities = 81/106 (76%), Positives = 94/106 (88%), Gaps = 1/106 (0%)
 Frame = +3

Query: 3   EIVLSACDGSPLAAITILKKICDHPLLLTKRAAEDVLEGMDSTVGPEDHHVAEKLAMHIA 182
           E+VLSA DGSPLAA+TILKKICDHPLLLTKRAAEDVLEGMD  + PED  +AEKLA+H+A
Sbjct: 681 ELVLSAFDGSPLAALTILKKICDHPLLLTKRAAEDVLEGMD-FISPEDAGLAEKLALHVA 739

Query: 183 DVAERYDIVENHD-ISCKISFILSLLGDLVPKGHNVLIFSQTRKML 317
           DVAE+ +  E HD ISCKISFI+SLL +L+P+GHNVLIFSQ+RKML
Sbjct: 740 DVAEKAEFQEKHDNISCKISFIMSLLDNLIPEGHNVLIFSQSRKML 785


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