BLASTX nr result

ID: Scutellaria23_contig00028603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028603
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   127   9e-28
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   123   2e-26
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   117   8e-25
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...   117   8e-25

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/105 (57%), Positives = 78/105 (74%)
 Frame = -1

Query: 315 KEEGKENGCVRKTGGSIGNCSKSGDATRSKGVVEEVQAKCSTKWGRYGGCIPAMLKAVET 136
           +  G +   + K GG +G   +SGDA     +VE+V   CSTKW  YGGCIP++L+A+ET
Sbjct: 92  RHSGGDGRTINKRGGVVG--FRSGDAN---DLVEKVSTNCSTKWLSYGGCIPSILRALET 146

Query: 135 IKDLDEALRPWQMTLTNKERSILLKEQLGWERAMEIFEWFKRKGC 1
           +KDLDEAL PW+ +L+NKERSI+LKEQ  WERA+EIFEW K+KGC
Sbjct: 147 VKDLDEALSPWEESLSNKERSIILKEQSCWERALEIFEWLKKKGC 191


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/105 (57%), Positives = 78/105 (74%)
 Frame = -1

Query: 315 KEEGKENGCVRKTGGSIGNCSKSGDATRSKGVVEEVQAKCSTKWGRYGGCIPAMLKAVET 136
           +  G +   + K GG +G   +SGDA     +VE+V   CSTKW  YGGCIP++L+A+ET
Sbjct: 92  RHSGGDGRTINKRGGVVG--FRSGDAN---DLVEKVSTNCSTKWLSYGGCIPSILRALET 146

Query: 135 IKDLDEALRPWQMTLTNKERSILLKEQLGWERAMEIFEWFKRKGC 1
           +KDLDEAL PW+ +L+NKERSI+LKEQ  WERA+EIFEW K+KGC
Sbjct: 147 VKDLDEALSPWEESLSNKERSIILKEQSCWERALEIFEWLKKKGC 191


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 13/141 (9%)
 Frame = -1

Query: 384 NGVVEKLYDRKSVSEDVKND-----GYGKEEGKENGC--VRKTGGS----IGNCSKSGDA 238
           NG V+K       S D  ND     G+GK+  ++N     RK G +    + N S     
Sbjct: 59  NGTVKKFGVIHKQSRDKANDSAHKNGFGKQALEQNPDRQQRKMGRNNYKTMNNKSLGVKF 118

Query: 237 TRSKG--VVEEVQAKCSTKWGRYGGCIPAMLKAVETIKDLDEALRPWQMTLTNKERSILL 64
            R  G   V++V+ KCSTKW  YGG IP++L+A+ETIK+LDEAL+PW+ TL+NKERSI+L
Sbjct: 119 HRINGNDSVDKVRTKCSTKWVNYGGSIPSILEALETIKNLDEALKPWEDTLSNKERSIIL 178

Query: 63  KEQLGWERAMEIFEWFKRKGC 1
           KEQ  WERAMEIFEWFK +GC
Sbjct: 179 KEQCSWERAMEIFEWFKSRGC 199


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  117 bits (294), Expect = 8e-25
 Identities = 55/89 (61%), Positives = 65/89 (73%)
 Frame = -1

Query: 267 IGNCSKSGDATRSKGVVEEVQAKCSTKWGRYGGCIPAMLKAVETIKDLDEALRPWQMTLT 88
           +G     GD     G VE+V AKCSTKW  YGGCIPA+L+A++ I DLDEAL+PW+  L 
Sbjct: 97  VGKKDAGGDGN---GSVEKVHAKCSTKWLSYGGCIPAILQALDEISDLDEALKPWKDKLN 153

Query: 87  NKERSILLKEQLGWERAMEIFEWFKRKGC 1
           NKERSI+LKEQ  WERA+EIFEWF   GC
Sbjct: 154 NKERSIILKEQTSWERALEIFEWFNMAGC 182


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g23020-like [Cucumis sativus]
          Length = 858

 Score =  117 bits (294), Expect = 8e-25
 Identities = 57/96 (59%), Positives = 67/96 (69%)
 Frame = -1

Query: 288 VRKTGGSIGNCSKSGDATRSKGVVEEVQAKCSTKWGRYGGCIPAMLKAVETIKDLDEALR 109
           V+K  G  GN           G VE+V AKCSTKW  YGGCIPA+L+A++ I DLDEAL+
Sbjct: 97  VKKDAGGDGN-----------GSVEKVHAKCSTKWLSYGGCIPAILQALDEISDLDEALK 145

Query: 108 PWQMTLTNKERSILLKEQLGWERAMEIFEWFKRKGC 1
           PW+  L NKERSI+LKEQ  WERA+EIFEWF   GC
Sbjct: 146 PWKDKLNNKERSIILKEQTSWERALEIFEWFNMAGC 181


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