BLASTX nr result

ID: Scutellaria23_contig00028560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028560
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   162   3e-38
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   150   1e-34
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   143   1e-32
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   140   1e-31
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ...   139   3e-31

>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/123 (71%), Positives = 98/123 (79%)
 Frame = -2

Query: 371 MEVSSLPIPASQRGKLISAGYTXXXXXXXXXXXXLAQDLKISENEAVEILKVASRRSGLD 192
           ME++ LPI ASQRGKLISAGYT            LAQDLKIS+NEA+EIL+V S+ S LD
Sbjct: 1   MELARLPISASQRGKLISAGYTSLSSLSSLSPSTLAQDLKISDNEALEILRVVSQGSRLD 60

Query: 191 KIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGK 12
           K  +G+ AI+NGAQTAWDMLHEEES  CITTSC DLD+ILGGGI  KEVTEIGGVPGIGK
Sbjct: 61  K-PDGSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGK 119

Query: 11  TQL 3
           TQL
Sbjct: 120 TQL 122


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  150 bits (378), Expect = 1e-34
 Identities = 83/123 (67%), Positives = 94/123 (76%)
 Frame = -2

Query: 371 MEVSSLPIPASQRGKLISAGYTXXXXXXXXXXXXLAQDLKISENEAVEILKVASRRSGLD 192
           MEVS LP+ ASQRGKLI AGYT            LA+DLKIS++EA+EILKVASR S LD
Sbjct: 1   MEVSRLPLSASQRGKLILAGYTSLSSLSSVSPSDLARDLKISDSEALEILKVASRNSRLD 60

Query: 191 KIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGK 12
            +E G  A++NGAQ AW+MLHEE S   ITTSC+DLD ILGGGI  KEVTEIGG+PGIGK
Sbjct: 61  GME-GCHAVINGAQNAWEMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLPGIGK 119

Query: 11  TQL 3
           TQL
Sbjct: 120 TQL 122


>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  143 bits (361), Expect = 1e-32
 Identities = 73/123 (59%), Positives = 90/123 (73%)
 Frame = -2

Query: 371 MEVSSLPIPASQRGKLISAGYTXXXXXXXXXXXXLAQDLKISENEAVEILKVASRRSGLD 192
           ME+  LPI AS+RGKL++AGYT            LA+D+++SE+EA+EIL  A+R S LD
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLARDIEVSESEALEILNFATRSSDLD 60

Query: 191 KIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGK 12
           K    N  +++G QTAWDML+EE  S  ITTSC DLD ILGGGI+ KEVTEIGGVPGIGK
Sbjct: 61  KSSGSNANVIHGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGK 120

Query: 11  TQL 3
           TQ+
Sbjct: 121 TQI 123


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/123 (57%), Positives = 89/123 (72%)
 Frame = -2

Query: 371 MEVSSLPIPASQRGKLISAGYTXXXXXXXXXXXXLAQDLKISENEAVEILKVASRRSGLD 192
           ME+  LPI AS+RGKL++AGYT            L +D+++SE+EA+EIL  A+R + LD
Sbjct: 1   MEIGMLPISASKRGKLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLD 60

Query: 191 KIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGK 12
           K    N  +++G QTAWDML+EE  S  ITTSC DLD ILGGGI+ KEVTEIGGVPGIGK
Sbjct: 61  KSSGSNTNVIDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGK 120

Query: 11  TQL 3
           TQ+
Sbjct: 121 TQI 123


>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
           sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
           repair protein RAD51 homolog 3-like [Cucumis sativus]
          Length = 346

 Score =  139 bits (349), Expect = 3e-31
 Identities = 74/123 (60%), Positives = 92/123 (74%)
 Frame = -2

Query: 371 MEVSSLPIPASQRGKLISAGYTXXXXXXXXXXXXLAQDLKISENEAVEILKVASRRSGLD 192
           MEV  LPI A+ RGKLIS+GYT            LA++L+IS NEA ++LK+AS   GLD
Sbjct: 1   MEVGRLPISATLRGKLISSGYTTLSSLASVSPSDLARELEISNNEAFDVLKLASHGRGLD 60

Query: 191 KIENGNCAIMNGAQTAWDMLHEEESSLCITTSCSDLDEILGGGIHSKEVTEIGGVPGIGK 12
           +  +G+ AI+NGA+TAWDMLH+E+    ITTSC+DLD +LGGGI+  EVTEIGGVPGIGK
Sbjct: 61  R-SDGSGAIVNGAETAWDMLHKEQFIPRITTSCADLDNLLGGGINVSEVTEIGGVPGIGK 119

Query: 11  TQL 3
           TQL
Sbjct: 120 TQL 122


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