BLASTX nr result

ID: Scutellaria23_contig00028555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028555
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    95   7e-18
ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_002525211.1| pentatricopeptide repeat-containing protein,...    89   4e-16

>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/95 (51%), Positives = 67/95 (70%)
 Frame = +3

Query: 3   LILCSTTADNFLASKLIAFYSKIHQPLNARHVFDQIPCKNTFAYNALLISYSVHNLHCET 182
           L+L S   DNFL SKLI+FYSK     +A +VF +IP KN F++NALLISY++HN+H + 
Sbjct: 29  LVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALLISYTLHNMHTDL 88

Query: 183 LKLFNSCLSGGDDYWDLADVKPDSFTLSCVLKAMS 287
           LKLF+S ++         DVKPD FT++C LKA++
Sbjct: 89  LKLFSSLVNSNS-----TDVKPDRFTVTCALKALA 118


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/95 (50%), Positives = 66/95 (69%)
 Frame = +3

Query: 3   LILCSTTADNFLASKLIAFYSKIHQPLNARHVFDQIPCKNTFAYNALLISYSVHNLHCET 182
           L+L S   DNFL SKLI+FYSK     +A +VF +IP KN F++NAL ISY++HN+H + 
Sbjct: 29  LVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKNIFSWNALFISYTLHNMHTDL 88

Query: 183 LKLFNSCLSGGDDYWDLADVKPDSFTLSCVLKAMS 287
           LKLF+S ++         DVKPD FT++C LKA++
Sbjct: 89  LKLFSSLVNSNS-----TDVKPDRFTVTCSLKALA 118


>ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Vitis vinifera]
          Length = 667

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/95 (51%), Positives = 64/95 (67%)
 Frame = +3

Query: 3   LILCSTTADNFLASKLIAFYSKIHQPLNARHVFDQIPCKNTFAYNALLISYSVHNLHCET 182
           ++L S T DNFLASKLI FYSK +    A  VFD+I  KN F++NA+LI YS+HN+H  T
Sbjct: 60  IVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHT 119

Query: 183 LKLFNSCLSGGDDYWDLADVKPDSFTLSCVLKAMS 287
           L L +S L           +KPD+FT++CVLKA+S
Sbjct: 120 LNLLSSLLPSYS-----LTLKPDNFTITCVLKALS 149


>ref|XP_002308496.1| predicted protein [Populus trichocarpa] gi|222854472|gb|EEE92019.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/95 (48%), Positives = 70/95 (73%)
 Frame = +3

Query: 3   LILCSTTADNFLASKLIAFYSKIHQPLNARHVFDQIPCKNTFAYNALLISYSVHNLHCET 182
           L+L S+T DN+L ++LI  YSK     +ARHVFDQIP KNTF+YNALLI+Y+++N H ET
Sbjct: 43  LLLSSSTLDNYLGARLINLYSKTKHIHHARHVFDQIPHKNTFSYNALLIAYTMNNHHKET 102

Query: 183 LKLFNSCLSGGDDYWDLADVKPDSFTLSCVLKAMS 287
           + LF+S L          D++P++++++C+LK++S
Sbjct: 103 INLFSSLLLSSS-----GDLQPNNYSITCLLKSLS 132


>ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535508|gb|EEF37177.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/95 (49%), Positives = 65/95 (68%)
 Frame = +3

Query: 3   LILCSTTADNFLASKLIAFYSKIHQPLNARHVFDQIPCKNTFAYNALLISYSVHNLHCET 182
           LIL S T +N+LASKL+A YSK +    AR+VFDQIP KNTF+YNA+LISYS+HN H + 
Sbjct: 50  LILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDA 109

Query: 183 LKLFNSCLSGGDDYWDLADVKPDSFTLSCVLKAMS 287
           L LF+S  S             ++ +++C+LK++S
Sbjct: 110 LDLFSSLASSN---------LVNNISITCLLKSLS 135


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