BLASTX nr result

ID: Scutellaria23_contig00028436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028436
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34194.3| unnamed protein product [Vitis vinifera]              191   6e-47
ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synt...   191   6e-47
ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C...   178   4e-43
ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ric...   178   4e-43
ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata...   176   2e-42

>emb|CBI34194.3| unnamed protein product [Vitis vinifera]
          Length = 693

 Score =  191 bits (485), Expect = 6e-47
 Identities = 99/182 (54%), Positives = 116/182 (63%)
 Frame = -3

Query: 548 NVVHLTSXXXXXXXXXXXXXXXXXXXXXDYSTEIESFRALAGDSDAEKLKTYIDQISLNV 369
           NVVHLTS                      Y++EIE FR+L GDSD E LK  IDQ++  +
Sbjct: 42  NVVHLTSLDAPPESMEKNETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGI 101

Query: 368 NNNDESITLTPSSDKSHRMAVHNFFKERLKFLVTDTVDSRDCLSKCIRVHLXXXXXXXXX 189
            +    I L+ SSDKSHR AVHNFFKE LKFLVTDT+D  D  SKCIRV L         
Sbjct: 102 EDGVSPIVLSSSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNG 161

Query: 188 XXXXXXXXXXXKPYDSRGSNNWPEHIGKFLRFHLYKENKDTQEALGLLSKMLGVKPRSFG 9
                      KP+DSRGS+NW EH+GKFLRFHLYKENKDTQEA+GL+ KMLG++PRSFG
Sbjct: 162 RNSRKRKDRRDKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFG 221

Query: 8   FS 3
           F+
Sbjct: 222 FA 223


>ref|XP_002272750.1| PREDICTED: multisubstrate pseudouridine synthase 7-like [Vitis
           vinifera]
          Length = 694

 Score =  191 bits (485), Expect = 6e-47
 Identities = 99/182 (54%), Positives = 116/182 (63%)
 Frame = -3

Query: 548 NVVHLTSXXXXXXXXXXXXXXXXXXXXXDYSTEIESFRALAGDSDAEKLKTYIDQISLNV 369
           NVVHLTS                      Y++EIE FR+L GDSD E LK  IDQ++  +
Sbjct: 42  NVVHLTSLDAPPESMEKNETKISDQSNKGYASEIELFRSLVGDSDVECLKGLIDQVASGI 101

Query: 368 NNNDESITLTPSSDKSHRMAVHNFFKERLKFLVTDTVDSRDCLSKCIRVHLXXXXXXXXX 189
            +    I L+ SSDKSHR AVHNFFKE LKFLVTDT+D  D  SKCIRV L         
Sbjct: 102 EDGVSPIVLSSSSDKSHRTAVHNFFKENLKFLVTDTIDGPDTSSKCIRVRLNSGGSHNNG 161

Query: 188 XXXXXXXXXXXKPYDSRGSNNWPEHIGKFLRFHLYKENKDTQEALGLLSKMLGVKPRSFG 9
                      KP+DSRGS+NW EH+GKFLRFHLYKENKDTQEA+GL+ KMLG++PRSFG
Sbjct: 162 RNSRKRKDRRDKPFDSRGSDNWSEHVGKFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFG 221

Query: 8   FS 3
           F+
Sbjct: 222 FA 223


>ref|XP_004142573.1| PREDICTED: putative pseudouridine synthase C1A4.09-like [Cucumis
           sativus]
          Length = 719

 Score =  178 bits (452), Expect = 4e-43
 Identities = 95/183 (51%), Positives = 118/183 (64%), Gaps = 1/183 (0%)
 Frame = -3

Query: 548 NVVHLTSXXXXXXXXXXXXXXXXXXXXXD-YSTEIESFRALAGDSDAEKLKTYIDQISLN 372
           NVVHLTS                       Y++EIE FR+LAGDSDAE L+ ++ QI+  
Sbjct: 81  NVVHLTSLDAPPEVIVSESGPTIVHSTSQSYASEIELFRSLAGDSDAEILEIFLKQINSG 140

Query: 371 VNNNDESITLTPSSDKSHRMAVHNFFKERLKFLVTDTVDSRDCLSKCIRVHLXXXXXXXX 192
           VN++   I  +P +DK+HR AVHNFFK + KFLVTDT+D  D  SKC+RV +        
Sbjct: 141 VNDDILPIVFSPDTDKTHRTAVHNFFK-KFKFLVTDTIDGPDSSSKCVRVRVDSGAQNNR 199

Query: 191 XXXXXXXXXXXXKPYDSRGSNNWPEHIGKFLRFHLYKENKDTQEALGLLSKMLGVKPRSF 12
                       KP+DSRGS+NWPEH+GKFLRFHLYKENKDTQEALGL+ KMLG++ RSF
Sbjct: 200 GRFSKKRKERGDKPFDSRGSDNWPEHVGKFLRFHLYKENKDTQEALGLIGKMLGIQTRSF 259

Query: 11  GFS 3
           GF+
Sbjct: 260 GFA 262


>ref|XP_002512230.1| tRNA pseudouridine synthase d, putative [Ricinus communis]
           gi|223548191|gb|EEF49682.1| tRNA pseudouridine synthase
           d, putative [Ricinus communis]
          Length = 753

 Score =  178 bits (452), Expect = 4e-43
 Identities = 90/155 (58%), Positives = 110/155 (70%), Gaps = 2/155 (1%)
 Frame = -3

Query: 461 YSTEIESFRALAGDSDAEKLKTYIDQISLNVNN-NDESITLTPSSDKSHRMAVHNFFKER 285
           Y+ EIESFR LAGD+D ++L+ +I+Q+    N  N   I L+P SDK+HR A HNFFKE+
Sbjct: 122 YAAEIESFRELAGDADTQRLEAFINQVISEDNCINISPILLSPDSDKAHRTATHNFFKEK 181

Query: 284 LKFLVTDTVDSRDCLSKCIRVHLXXXXXXXXXXXXXXXXXXXXK-PYDSRGSNNWPEHIG 108
           LKFLVTDTVD  D  SKCIRV L                      P+DSRGS++WPEH+G
Sbjct: 182 LKFLVTDTVDGPDASSKCIRVRLNSRGNINEGNRNSKKRKDRNDKPFDSRGSDHWPEHLG 241

Query: 107 KFLRFHLYKENKDTQEALGLLSKMLGVKPRSFGFS 3
           KFLRFHLYKENKDTQEA+GL+ KMLG++PRSFGF+
Sbjct: 242 KFLRFHLYKENKDTQEAIGLIGKMLGIQPRSFGFA 276


>ref|XP_002884472.1| pseudouridylate synthase [Arabidopsis lyrata subsp. lyrata]
           gi|297330312|gb|EFH60731.1| pseudouridylate synthase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/153 (56%), Positives = 108/153 (70%)
 Frame = -3

Query: 461 YSTEIESFRALAGDSDAEKLKTYIDQISLNVNNNDESITLTPSSDKSHRMAVHNFFKERL 282
           Y++ IESFR+++  +DAE+L+T I+Q++   ++    + L PSSDKS R A+HNF KE  
Sbjct: 110 YTSAIESFRSISSVTDAERLETLINQVTSGTDDEISPVVLDPSSDKSKRTAIHNFVKENF 169

Query: 281 KFLVTDTVDSRDCLSKCIRVHLXXXXXXXXXXXXXXXXXXXXKPYDSRGSNNWPEHIGKF 102
           KFLVTDTVD  D  SKCIRV +                    KP+DSRGS +WPEH+GKF
Sbjct: 170 KFLVTDTVDGPDSTSKCIRVRVNSGAHNNRGNRSKKRKERGDKPFDSRGSEHWPEHVGKF 229

Query: 101 LRFHLYKENKDTQEALGLLSKMLGVKPRSFGFS 3
           LRFHLYKENKDTQEALGL+ KMLGV+P+SFGFS
Sbjct: 230 LRFHLYKENKDTQEALGLIGKMLGVQPKSFGFS 262


Top