BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028431
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|2...   249   8e-64
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...   247   2e-63
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...   227   3e-57
ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subun...   219   9e-55
ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   216   5e-54

>ref|XP_002303484.1| predicted protein [Populus trichocarpa] gi|222840916|gb|EEE78463.1|
            predicted protein [Populus trichocarpa]
          Length = 769

 Score =  249 bits (635), Expect = 8e-64
 Identities = 137/241 (56%), Positives = 176/241 (73%), Gaps = 21/241 (8%)
 Frame = +3

Query: 3    RYSFMDLWPCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGK 182
            RYSFMDLWPCS+KDLDHLARQEWL+KN+NKK E S  +NGP++ D+  + + +NSN+ GK
Sbjct: 513  RYSFMDLWPCSSKDLDHLARQEWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGK 572

Query: 183  IVYPDVSRMVIYGPTQK------PGTPASVLPVASSTLPNGLITGATTATNDMLKALPPS 344
            ++YPD S+ VIY P QK      P T AS    AS+ L N  I  A    +++LKA PP+
Sbjct: 573  VIYPDTSQTVIYDPRQKLEAGIPPSTTASGFKAASNPLSNP-IGLAPNVFDEVLKATPPA 631

Query: 345  LAAFVANLPAVEGPSPDVDFVISICLQSNVP-SATGKSVTQQ----PAPSTSDLSGSTKY 509
            L +F+ANLP VEGP+P+VD V+SICLQS+VP   TGKS T Q      P+TSDLSGS++ 
Sbjct: 632  LISFLANLPVVEGPAPNVDIVLSICLQSDVPVGKTGKSGTTQTPMLSGPATSDLSGSSRS 691

Query: 510  K--------QSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR--ATSSR 659
            +        ++RDRQS GKRKD DRQ++DET+TVQSQPLPRD F+IRQ+QK+R  AT+S+
Sbjct: 692  RPVPSGSSFKTRDRQS-GKRKDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQ 750

Query: 660  T 662
            T
Sbjct: 751  T 751


>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
            gi|297736046|emb|CBI24084.3| unnamed protein product
            [Vitis vinifera]
          Length = 769

 Score =  247 bits (631), Expect = 2e-63
 Identities = 138/243 (56%), Positives = 167/243 (68%), Gaps = 23/243 (9%)
 Frame = +3

Query: 3    RYSFMDLWPCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGK 182
            RYSFMDLWPCS++DLDHLARQEWL+KN+NKK+E S    G  S ++S S    NSN   K
Sbjct: 510  RYSFMDLWPCSSRDLDHLARQEWLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPATK 569

Query: 183  IVYPDVSRMVIYGPTQKPG------TPASVLPVASSTLPNGLI----TGATTATNDMLKA 332
            + YPD S+MV+Y P QKPG      T A VLP  S TL N  +    +      +++LK+
Sbjct: 570  VFYPDTSQMVVYDPRQKPGTGALPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILKS 629

Query: 333  LPPSLAAFVANLPAVEGPSPDVDFVISICLQSNVPSA-TGKS--VTQQPAPSTSDLSGST 503
             PP+L AF+ANLPAVEGPSPDVD V+SICLQSNV +  TG S  +   P PSTSDLSGS+
Sbjct: 630  TPPALVAFIANLPAVEGPSPDVDVVLSICLQSNVSTGQTGLSTQLAAGPVPSTSDLSGSS 689

Query: 504  K---------YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATS 653
            K         +K  RDRQ  GKRKD DRQ+DDET+T QS PLPRD FKIRQ++KAR  T+
Sbjct: 690  KSHPVPSGSSFKPMRDRQP-GKRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKARGGTT 748

Query: 654  SRT 662
            S+T
Sbjct: 749  SQT 751


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
            gi|223541464|gb|EEF43014.1| plant RNA cleavage
            stimulation factor, putative [Ricinus communis]
          Length = 767

 Score =  227 bits (579), Expect = 3e-57
 Identities = 126/240 (52%), Positives = 162/240 (67%), Gaps = 20/240 (8%)
 Frame = +3

Query: 3    RYSFMDLWPCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGK 182
            RYSFMDLWPCS+KDLDHLARQEWL+KN++KK+E S  +NG    DR  + + +NS +  K
Sbjct: 511  RYSFMDLWPCSSKDLDHLARQEWLAKNISKKMEKSTISNGLGILDRVSTGLKSNSAVSAK 570

Query: 183  IVYPDVSRMVIYGPTQKPGTPASVLPVA---------SSTLPNGLITGATTATNDMLKAL 335
            ++YPD S M IY P QK     S+   A         SS    GL+     A +++LKA 
Sbjct: 571  VIYPDTSSMAIYEPRQKHEVGISLSTTATGFGSASNPSSNTIVGLVGSGANAFDEILKAT 630

Query: 336  PPSLAAFVANLPAVEGPSPDVDFVISICLQSNVPS------ATGKSVTQQPAPSTSDLSG 497
            PP+L +F++ LP VEGP+P+VD V+SICLQS + +       T  +V   PAP+TSDLSG
Sbjct: 631  PPALISFLSTLPTVEGPTPNVDIVLSICLQSELTNGQMGKLGTSPAVPAPPAPATSDLSG 690

Query: 498  STK----YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATSSRT 662
            S+K     K SRDRQS GKRKD +RQ++DET+TVQSQPLPRD F+IR  QKAR  T+S+T
Sbjct: 691  SSKSRPVLKPSRDRQS-GKRKDIERQEEDETATVQSQPLPRDIFRIRHSQKARVGTASQT 749


>ref|XP_003555072.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
          Length = 832

 Score =  219 bits (557), Expect = 9e-55
 Identities = 126/250 (50%), Positives = 161/250 (64%), Gaps = 32/250 (12%)
 Frame = +3

Query: 3    RYSFMDLWPCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGK 182
            RYSFMDLWPCS+ DLDHLARQ+WL+KN+NKK+E S+  NG +  D+  + + + S M  K
Sbjct: 567  RYSFMDLWPCSSNDLDHLARQQWLAKNINKKVEKSILPNGTTLLDK--TSMASISTMPSK 624

Query: 183  IVYPDVSRMVIYGPTQKPGTPASVLPVASSTLPNGLITGA-TTATNDMLKALPPSLAAFV 359
            IVYPD S+MVIY P   PG            L   L+ GA T A +++LKA PP+L +F+
Sbjct: 625  IVYPDTSKMVIYDPKHTPGRCGKPKEHLGPCLIQLLVAGAGTNAFDEILKATPPALVSFL 684

Query: 360  ANLPAVEGPSPDVDFVISICLQSNVPSATGKSVT---------------------QQPAP 476
            ANLPAVEGP P+VD V+SICLQS++P  TG+SV                        PA 
Sbjct: 685  ANLPAVEGPMPNVDIVLSICLQSDLP--TGQSVKTGIPTQVQSGKAGIPALLPAGSAPAA 742

Query: 477  STSDLSGSTK----------YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIR 626
            + S+LSGS+K           K   +RQ  GKRK+ DRQD+D+T+TVQSQPLPRDAF+IR
Sbjct: 743  AASELSGSSKSHPAPSGGVSLKPGSNRQY-GKRKEPDRQDEDDTTTVQSQPLPRDAFRIR 801

Query: 627  QLQKARATSS 656
            Q QKARA+S+
Sbjct: 802  QYQKARASSA 811


>ref|XP_004165274.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           3-like [Cucumis sativus]
          Length = 460

 Score =  216 bits (551), Expect = 5e-54
 Identities = 123/241 (51%), Positives = 167/241 (69%), Gaps = 21/241 (8%)
 Frame = +3

Query: 3   RYSFMDLWPCSTKDLDHLARQEWLSKNLNKKIENSVPANGPSSADRSISDIPNNSNMFGK 182
           RYSFMDLWPC++ DLD+L RQEWL+KN++K  E S    G    D   +   ++S    K
Sbjct: 204 RYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTK 263

Query: 183 IVYPDVSRMVIYGPTQ----KPGTPASVLPVASSTLPNGLITGATTAT-NDMLKALPPSL 347
           +VYPD S+MVIY P+Q     P   AS LP A+ + P  + +GA T+  +++LKA P +L
Sbjct: 264 VVYPDTSQMVIYDPSQILGILPTATASGLP-ANPSNPVSVASGAPTSVFDEILKATPAAL 322

Query: 348 AAFVANLPAVEGPSPDVDFVISICLQSNVPS-------ATGKSVTQQPAPSTSDLSGSTK 506
            AF+ANLPAV+GP+PDVD V+S+CL+S++P+       AT   V+  P P+TSDLSGS+K
Sbjct: 323 IAFLANLPAVDGPTPDVDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSK 382

Query: 507 --------YKQSRDRQSGGKRKDSDRQDDDETSTVQSQPLPRDAFKIRQLQKAR-ATSSR 659
                    K +RD+QS GKRKD DRQ+D+E++TVQSQP+P+D F+IRQ+QKAR ATSS+
Sbjct: 383 SHAFSNSSLKHTRDKQS-GKRKDYDRQEDNESTTVQSQPMPKDXFRIRQIQKARGATSSQ 441

Query: 660 T 662
           T
Sbjct: 442 T 442