BLASTX nr result

ID: Scutellaria23_contig00028302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028302
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511099.1| pentatricopeptide repeat-containing protein,...   100   1e-19
ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]    99   5e-19
ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CBI28459.3| unnamed protein product [Vitis vinifera]               91   1e-16

>ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550214|gb|EEF51701.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1151

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/137 (40%), Positives = 77/137 (56%)
 Frame = +2

Query: 68  RRLIERTRILCISIKXXXXXXXXPQSEATAVEITKILNHNNWQFVLESSHIPQSLNPDVV 247
           R LI   R   I            QS+ T  EIT +L   NWQF++ESS +P  LNPDVV
Sbjct: 16  RTLISTLRTHSIKSNSFSTNADTNQSDNTVKEITSLLKQKNWQFLIESSPLPNKLNPDVV 75

Query: 248 HSVLQRSLFSIHPRRLLDFFNWSNQHLGTSQNLQSFSMLALVLCSSNLYAPAISVLNKMI 427
             V++++   I P+RL  FFNW N     SQNL +FS+L+L+LC+S L+  A +VL +MI
Sbjct: 76  FLVIKQNQV-IDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMI 134

Query: 428 EAPISVADVLGSTLSIY 478
           +       +L S +  Y
Sbjct: 135 DTRNPHVKILDSIIKCY 151


>ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/109 (44%), Positives = 68/109 (62%)
 Frame = +2

Query: 161 EITKILNHNNWQFVLESSHIPQSLNPDVVHSVLQRSLFSIHPRRLLDFFNWSNQHLGTSQ 340
           +I+  L  NNW+ ++ SSHIP  LNPDV+ +VL ++     P+RLLDFF WS   +G  Q
Sbjct: 44  QISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVG-DPKRLLDFFYWSQSQMGVPQ 102

Query: 341 NLQSFSMLALVLCSSNLYAPAISVLNKMIEAPISVADVLGSTLSIYNGY 487
            L SFS+LA+ LC+S L+  A  VL +MI  P S + +L S L  +  Y
Sbjct: 103 FLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNY 151


>emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/109 (44%), Positives = 68/109 (62%)
 Frame = +2

Query: 161 EITKILNHNNWQFVLESSHIPQSLNPDVVHSVLQRSLFSIHPRRLLDFFNWSNQHLGTSQ 340
           +I+  L  NNW+ ++ SSHIP  LNPDV+ +VL ++     P+RLLDFF WS   +G  Q
Sbjct: 46  QISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVG-DPKRLLDFFYWSQSQMGVPQ 104

Query: 341 NLQSFSMLALVLCSSNLYAPAISVLNKMIEAPISVADVLGSTLSIYNGY 487
            L SFS+LA+ LC+S L+  A  VL +MI  P S + +L S L  +  Y
Sbjct: 105 FLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNY 153


>ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
 Frame = +2

Query: 140 QSEATAVEITKILNHNNWQFVLESSHIPQSLNPDVVHSVLQRSLFSIHPRRLLDFFNWSN 319
           Q+E +  EIT +LN +NWQ ++ESS IP+ LN D++ SV+ ++     P+RLL+FF WS 
Sbjct: 22  QNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVG-DPKRLLNFFYWSQ 80

Query: 320 QHLGTS---QNLQSFSMLALVLCSSNLYAPAISVLNKMIEAPISVADVLGSTLSIY---N 481
             +GTS   Q+L   S LA+ LC+SN Y PA  ++  +I    S   VLGS +  Y   N
Sbjct: 81  HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCN 140

Query: 482 GYP 490
           G P
Sbjct: 141 GSP 143


>emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
 Frame = +2

Query: 140 QSEATAVEITKILNHNNWQFVLESSHIPQSLNPDVVHSVLQRSLFSIHPRRLLDFFNWSN 319
           Q+E +  EIT +LN +NWQ ++ESS IP+ LN D++ SV+ ++     P+RLL+FF WS 
Sbjct: 31  QNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQNQVG-DPKRLLNFFYWSQ 89

Query: 320 QHLGTS---QNLQSFSMLALVLCSSNLYAPAISVLNKMIEAPISVADVLGSTLSIY---N 481
             +GTS   Q+L   S LA+ LC+SN Y PA  ++  +I    S   VLGS +  Y   N
Sbjct: 90  HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAVLGSIVKCYRSCN 149

Query: 482 GYP 490
           G P
Sbjct: 150 GSP 152


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