BLASTX nr result

ID: Scutellaria23_contig00028287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028287
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   239   1e-61
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   233   1e-59
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   229   1e-58
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   227   9e-58

>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  239 bits (611), Expect = 1e-61
 Identities = 116/156 (74%), Positives = 132/156 (84%)
 Frame = +1

Query: 1   IVETMRNAGYEPDNITYSQLVFGLCKARRFDEASKVLEMMEEQGCIPDIKTWTILIKGHC 180
           IV++MRNAGYEPDN+TYSQLVFGLCKARR +EA KVL+ ME QGCIPDIKTWTILI+GHC
Sbjct: 387 IVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHC 446

Query: 181 SANETGEALVCFAKMMEKGFDADADLLDVLIGGFISQSRTVGAYKLLIELVQKVRLRPWQ 360
           +ANE   ALVCFAKM+EK  D DADLLDVLI GF++Q +  GAY+LLIEL  K  +RPWQ
Sbjct: 447 NANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQ 506

Query: 361 STYKFLIQKLLTERKLEEAMELLRLMKKHNYPPFPE 468
           +TYK LI+ LL  RKLEEA+ LLRLMKK NYPPFPE
Sbjct: 507 ATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPE 542


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  233 bits (594), Expect = 1e-59
 Identities = 112/154 (72%), Positives = 128/154 (83%)
 Frame = +1

Query: 1   IVETMRNAGYEPDNITYSQLVFGLCKARRFDEASKVLEMMEEQGCIPDIKTWTILIKGHC 180
           IV TMRNAGYEPDNITYSQ+VFGLCK RRF+EA KVLE ME   CIPDIKTWTILI+GHC
Sbjct: 393 IVRTMRNAGYEPDNITYSQMVFGLCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHC 452

Query: 181 SANETGEALVCFAKMMEKGFDADADLLDVLIGGFISQSRTVGAYKLLIELVQKVRLRPWQ 360
           SANE  +AL+CFAKM+EKG D DADLLDVL  GF+SQ R  GAY+L+ E+ +K R+ PWQ
Sbjct: 453 SANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQ 512

Query: 361 STYKFLIQKLLTERKLEEAMELLRLMKKHNYPPF 462
           +TYK LI+KLL   K EEA+ELLRLMK HNYPP+
Sbjct: 513 ATYKKLIEKLLGVMKFEEALELLRLMKSHNYPPY 546


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  229 bits (585), Expect = 1e-58
 Identities = 109/156 (69%), Positives = 129/156 (82%)
 Frame = +1

Query: 1   IVETMRNAGYEPDNITYSQLVFGLCKARRFDEASKVLEMMEEQGCIPDIKTWTILIKGHC 180
           +++ M+ AGYEPDNITYSQLVFGLCKARR +EA +VL+ ME  GC+PDIKTWTILI+GHC
Sbjct: 392 MMKCMQTAGYEPDNITYSQLVFGLCKARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHC 451

Query: 181 SANETGEALVCFAKMMEKGFDADADLLDVLIGGFISQSRTVGAYKLLIELVQKVRLRPWQ 360
            ANE G+AL+C AKMMEK  D DADLL VLI  F+SQ R  GAY L +++V K RLRPWQ
Sbjct: 452 VANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQ 511

Query: 361 STYKFLIQKLLTERKLEEAMELLRLMKKHNYPPFPE 468
           +TYK LI+KLL  RKLEEA+ LLRLMK+HN+PPFPE
Sbjct: 512 ATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPE 547


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/156 (69%), Positives = 129/156 (82%)
 Frame = +1

Query: 1   IVETMRNAGYEPDNITYSQLVFGLCKARRFDEASKVLEMMEEQGCIPDIKTWTILIKGHC 180
           I+E+MR+AG EPDNITYSQLV+GLCKAR+ +EA K+L+ ME  GC+PDIKTWTILI+GHC
Sbjct: 394 IMESMRSAGCEPDNITYSQLVYGLCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGHC 453

Query: 181 SANETGEALVCFAKMMEKGFDADADLLDVLIGGFISQSRTVGAYKLLIELVQKVRLRPWQ 360
           +A E  +AL+CFAKMMEK  DADADLL+VLI GF+SQ R  GAYKLL+E+V    L PWQ
Sbjct: 454 AAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQ 513

Query: 361 STYKFLIQKLLTERKLEEAMELLRLMKKHNYPPFPE 468
           +TYK +I KLL  RKLEEA+ LL LMKK NYPPFPE
Sbjct: 514 ATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPE 549


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  227 bits (578), Expect = 9e-58
 Identities = 108/156 (69%), Positives = 128/156 (82%)
 Frame = +1

Query: 1   IVETMRNAGYEPDNITYSQLVFGLCKARRFDEASKVLEMMEEQGCIPDIKTWTILIKGHC 180
           IV+ MR+AGYEPDNITYSQLVFGLCK++R +EA KVL+ ME  GCIPDIKTWTILI+GH 
Sbjct: 241 IVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHF 300

Query: 181 SANETGEALVCFAKMMEKGFDADADLLDVLIGGFISQSRTVGAYKLLIELVQKVRLRPWQ 360
           +AN+  + L+C  KM EK  D DADLLDVL+ GF+SQ +  GAY  L+E+V K+RL PWQ
Sbjct: 301 AANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQ 360

Query: 361 STYKFLIQKLLTERKLEEAMELLRLMKKHNYPPFPE 468
           +TYK LI+KLL  RKLEEA +LLRLMKKHNYPPFPE
Sbjct: 361 ATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPE 396


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