BLASTX nr result

ID: Scutellaria23_contig00028283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028283
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302117.1| SecY protein [Populus trichocarpa] gi|222843...    44   8e-06

>ref|XP_002302117.1| SecY protein [Populus trichocarpa] gi|222843843|gb|EEE81390.1| SecY
           protein [Populus trichocarpa]
          Length = 552

 Score = 43.5 bits (101), Expect(2) = 8e-06
 Identities = 25/40 (62%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = -1

Query: 155 ILDHHLCR--EGFPIGFASILIIVGLINEL*RSYEV*SCM 42
           ILDH+L R  EGF IGF S+LIIVG I EL RSY+  + M
Sbjct: 501 ILDHYLRRINEGFAIGFTSVLIIVGSIIELRRSYQAYNVM 540



 Score = 30.8 bits (68), Expect(2) = 8e-06
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = -3

Query: 228 YLTKIQASIRFGAGLLLS 175
           YLTKIQAS RF  GLLLS
Sbjct: 476 YLTKIQASTRFWGGLLLS 493


Top