BLASTX nr result

ID: Scutellaria23_contig00028248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028248
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein lig...    72   4e-11
ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein lig...    72   4e-11
emb|CBI21880.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein lig...    71   1e-10
ref|XP_002328052.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10

>ref|XP_002274885.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
           vinifera]
          Length = 412

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
 Frame = -3

Query: 396 LRDDLDFDTLISSVYPNVGKYXXXXXXXXXXEKAVNDQIQASITQISLRQSEALVKARKI 217
           LRDD ++D LI+++YP++ KY          E+  N QIQASI QI  RQSEAL + R +
Sbjct: 74  LRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASIAQILQRQSEALNRKRTL 133

Query: 216 GRD-SNASTSRVPRNTRRSYYRRSE----PSIKFDDSSKNQDESDGGLTYECQPELSQRT 52
           G+D +    +R  RN R +Y RR +      ++  D +++++++DGG       E S   
Sbjct: 134 GKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDENDNDGGKGSSSAEERSTEV 193

Query: 51  RRQ 43
           +R+
Sbjct: 194 KRR 196


>ref|XP_003539938.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 433

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 51/130 (39%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
 Frame = -3

Query: 396 LRDDLDFDTLISSVYPNVGKYXXXXXXXXXXEKAVNDQIQASITQISLRQSEALVKARKI 217
           LRDD ++D LI+++YPN+ KY          +K  N QIQASI +++ RQSEALVK R  
Sbjct: 110 LRDDPNYDALIAALYPNIEKYEIEELQFCEEDKNRNKQIQASIAKVAQRQSEALVKRR-- 167

Query: 216 GRDSNAS-TSRVPRNTRRSYYRRSEPSIKFDDSSKNQDES-----DGGLTYECQPELSQR 55
            RD+  S  +R  RN +    RR    I    S  N+DE+     D   T E   EL QR
Sbjct: 168 -RDTPGSFVTRSQRNQQNVLSRRQNQVIDNQGSEDNEDENDNNEKDSSSTDERCTELRQR 226

Query: 54  TRRQCEEASP 25
            R++     P
Sbjct: 227 RRKRQTRGRP 236


>emb|CBI21880.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
 Frame = -3

Query: 396 LRDDLDFDTLISSVYPNVGKYXXXXXXXXXXEKAVNDQIQASITQISLRQSEALVKARKI 217
           LRDD ++D LI+++YP++ KY          E+  N QIQASI QI  RQSEAL + R +
Sbjct: 230 LRDDPNYDALIAALYPDIDKYEEEELAFHEEEQTRNKQIQASIAQILQRQSEALNRKRTL 289

Query: 216 GRD-SNASTSRVPRNTRRSYYRRSE----PSIKFDDSSKNQDESDGGLTYECQPELSQRT 52
           G+D +    +R  RN R +Y RR +      ++  D +++++++DGG       E S   
Sbjct: 290 GKDIAGPFMTRSQRNYRNAYSRRRKNGRGSDLQGSDDNEDENDNDGGKGSSSAEERSTEV 349

Query: 51  RRQ 43
           +R+
Sbjct: 350 KRR 352


>ref|XP_003526270.1| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like
           [Glycine max]
          Length = 455

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
 Frame = -3

Query: 396 LRDDLDFDTLISSVYPNVGKYXXXXXXXXXXEKAVNDQIQASITQISLRQSEALVKARKI 217
           LRDD ++D LI+++YPN+ KY          +K  N QIQASI ++  RQSEALVK R  
Sbjct: 132 LRDDPNYDALIAALYPNIEKYEQEELEFREEDKNRNKQIQASIAKVVQRQSEALVKRR-- 189

Query: 216 GRDSNAS-TSRVPRNTRRSYYRRSEPSIKFDDSSKNQDES-----DGGLTYECQPELSQR 55
            RD+  S  +R  RN R    RR    +    S  N++E+     D   T E   EL QR
Sbjct: 190 -RDTPGSFVTRSQRNQRNVLSRRQNQGMDNQGSEDNEEENDNNEKDSSSTDERCTELRQR 248

Query: 54  TRRQCEEASP 25
            R++     P
Sbjct: 249 RRKRRTRGRP 258


>ref|XP_002328052.1| predicted protein [Populus trichocarpa] gi|222837461|gb|EEE75840.1|
           predicted protein [Populus trichocarpa]
          Length = 497

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/103 (42%), Positives = 58/103 (56%)
 Frame = -3

Query: 396 LRDDLDFDTLISSVYPNVGKYXXXXXXXXXXEKAVNDQIQASITQISLRQSEALVKARKI 217
           LRDD ++D LI+++YP++ KY          E   N QIQASI QI  RQSEALVK R +
Sbjct: 182 LRDDPNYDALIAALYPDIDKYEEEELAFHEEEMTRNKQIQASIAQIIQRQSEALVKRRTM 241

Query: 216 GRDSNASTSRVPRNTRRSYYRRSEPSIKFDDSSKNQDESDGGL 88
           G++S   T      TRR   RR+  S  F  S   +DE+D  +
Sbjct: 242 GKESTFMTRTRRTITRR---RRNSRSSDFQGSEDIEDENDDNI 281


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