BLASTX nr result

ID: Scutellaria23_contig00028117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028117
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   152   2e-35
ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   150   1e-34
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   150   1e-34
ref|XP_003576935.1| PREDICTED: structural maintenance of chromos...   150   1e-34

>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cucumis sativus]
          Length = 1052

 Score =  152 bits (385), Expect = 2e-35
 Identities = 77/122 (63%), Positives = 95/122 (77%)
 Frame = +1

Query: 1   EDLREIVEHFNIDVDNPCVVMSQDRSREFLHSGNAXXXXXXXXXATLLQQVDDLLKGIEK 180
           ++LRE+VEHFNIDV+NPCV+MSQD+SREFLHSGN          ATLLQQVDDLLK I  
Sbjct: 135 DELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFD 194

Query: 181 QLNDATALVNHLEESLRPVLKELDQLHEKIKNMEFMEEITQQYQLVRKKLAWSHVYDKEE 360
            L  A ALV+ LE ++RPV KEL++L  KIKNME +EEI+QQ Q ++KKLAWS VYD ++
Sbjct: 195 NLRSANALVDDLESTIRPVEKELNELRGKIKNMEQVEEISQQVQQLKKKLAWSWVYDVDK 254

Query: 361 KL 366
           +L
Sbjct: 255 QL 256


>ref|XP_002303494.1| predicted protein [Populus trichocarpa] gi|222840926|gb|EEE78473.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/137 (56%), Positives = 99/137 (72%)
 Frame = +1

Query: 1   EDLREIVEHFNIDVDNPCVVMSQDRSREFLHSGNAXXXXXXXXXATLLQQVDDLLKGIEK 180
           EDLRE++EHFNIDV+NPCV+MSQD+SREFLHSGN          ATLLQQV+DLL  I +
Sbjct: 142 EDLRELIEHFNIDVENPCVIMSQDKSREFLHSGNEKDKFKFFFKATLLQQVNDLLLSINE 201

Query: 181 QLNDATALVNHLEESLRPVLKELDQLHEKIKNMEFMEEITQQYQLVRKKLAWSHVYDKEE 360
           QL  A ALV+ LE S++P+ KEL +L  KIKNME +EE++QQ Q ++KKLAWS VY  ++
Sbjct: 202 QLKSANALVDELEASIKPIEKELTELQGKIKNMEHLEEMSQQAQQLKKKLAWSWVYSVDK 261

Query: 361 KLISNIS*LKS*KEGYP 411
           +L   +  L   KE  P
Sbjct: 262 ELQEQMVKLGKLKERIP 278


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  150 bits (379), Expect = 1e-34
 Identities = 76/122 (62%), Positives = 94/122 (77%)
 Frame = +1

Query: 1   EDLREIVEHFNIDVDNPCVVMSQDRSREFLHSGNAXXXXXXXXXATLLQQVDDLLKGIEK 180
           ++LRE+VEHFNIDV+NPCV+MSQD+SREFLHSGN          ATLLQQVDDLLK I  
Sbjct: 135 DELRELVEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVDDLLKNIFD 194

Query: 181 QLNDATALVNHLEESLRPVLKELDQLHEKIKNMEFMEEITQQYQLVRKKLAWSHVYDKEE 360
            L  A ALV+ LE ++RPV KEL++L  K KNME +EEI+QQ Q ++KKLAWS VYD ++
Sbjct: 195 NLRSANALVDDLESTIRPVEKELNELXRKNKNMEQVEEISQQVQQLKKKLAWSWVYDVDK 254

Query: 361 KL 366
           +L
Sbjct: 255 QL 256


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/122 (59%), Positives = 97/122 (79%)
 Frame = +1

Query: 1   EDLREIVEHFNIDVDNPCVVMSQDRSREFLHSGNAXXXXXXXXXATLLQQVDDLLKGIEK 180
           E+LRE+VEH+NIDV+NPCV+MSQD+SREFLHSGN          ATLLQQVDD+L+ I  
Sbjct: 142 EELRELVEHYNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDILQSIGT 201

Query: 181 QLNDATALVNHLEESLRPVLKELDQLHEKIKNMEFMEEITQQYQLVRKKLAWSHVYDKEE 360
           +LN A AL++ +E++++P+ KE+++L EKIKNME +EEITQQ   ++KKLAWS VYD + 
Sbjct: 202 KLNSANALLDEMEKTIKPIEKEINELLEKIKNMEHVEEITQQVLHLKKKLAWSWVYDVDR 261

Query: 361 KL 366
           +L
Sbjct: 262 QL 263


>ref|XP_003576935.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Brachypodium distachyon]
          Length = 1039

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/137 (54%), Positives = 102/137 (74%)
 Frame = +1

Query: 1   EDLREIVEHFNIDVDNPCVVMSQDRSREFLHSGNAXXXXXXXXXATLLQQVDDLLKGIEK 180
           +DL EI+EHFNIDV+NPCV+MSQD+SREFLHSGN          ATLLQQV++LL+ I+ 
Sbjct: 124 DDLTEIIEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKATLLQQVNELLETIKD 183

Query: 181 QLNDATALVNHLEESLRPVLKELDQLHEKIKNMEFMEEITQQYQLVRKKLAWSHVYDKEE 360
           QLN+A ++V  LE+S++PV++ELD+L +KIKNME +EEI+     ++KKLAWS VYD ++
Sbjct: 184 QLNNADSIVEELEKSIKPVMRELDELRQKIKNMEHIEEISHDIDNLKKKLAWSWVYDVDK 243

Query: 361 KLISNIS*LKS*KEGYP 411
           ++      L+  KE  P
Sbjct: 244 QIGEQTVKLQKLKERIP 260


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