BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028074
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19898.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...   129   3e-28
ref|XP_002875292.1| transcription factor S-II domain-containing ...   124   1e-26
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...   121   5e-26
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...   121   7e-26

>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/123 (51%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
 Frame = +1

Query: 4   YSHQRDFMFCEMCGTMLSFDTPEYARCPLCKFQKRLKEIAGKVIRYTISGEDLRRELGVS 183
           YS QRDFMFC +CGTML   + +YA CPLCK ++++K+I+G+ IRYT+S ED+RREL + 
Sbjct: 3   YSRQRDFMFCNLCGTMLCMSSTKYAECPLCKSRRKVKDISGREIRYTVSAEDIRRELNIE 62

Query: 184 ---SLDD-IEEERELKQMDYNAKCKACQH-LGLAYVARQIRSADEGQTIFYTCPVCAHKQ 348
               LD  I EE E +      +C  C+    L Y  RQ+RSADEGQTIFY C  C HK 
Sbjct: 63  PFVKLDGIITEESEAQNAKTKGRCDRCEEDTWLYYYTRQLRSADEGQTIFYECTKCGHKW 122

Query: 349 TEN 357
           ++N
Sbjct: 123 SQN 125


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/118 (51%), Positives = 80/118 (67%)
 Frame = +1

Query: 4   YSHQRDFMFCEMCGTMLSFDTPEYARCPLCKFQKRLKEIAGKVIRYTISGEDLRRELGVS 183
           YS  RDF+FC +CGTML+  + +YA CPLCK +  +K+I GK I YTIS ED+RRELG+ 
Sbjct: 2   YSRGRDFLFCHLCGTMLTVPSTDYALCPLCKTKCNIKDIKGKEISYTISAEDIRRELGI- 60

Query: 184 SLDDIEEERELKQMDYNAKCKACQHLGLAYVARQIRSADEGQTIFYTCPVCAHKQTEN 357
              D+ EE++++    N  C+ C H   A+  RQ+RSADEGQT FYTC  C H+  EN
Sbjct: 61  ---DLIEEQKVQLSKVNKTCEKCGHGEAAFYTRQMRSADEGQTTFYTCTRCGHQFQEN 115


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/117 (51%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
 Frame = +1

Query: 7   SHQRDFMFCEMCGTMLSFDTPEYARCPLCKFQKRLKEIAGKVIRYTISGEDLRRELGVSS 186
           S +  F+FC  CGTML   + +YA CPLCK  +  KEI  K I YT++ ED+RRELG+S 
Sbjct: 4   SRESGFLFCNWCGTMLVLKSTKYAECPLCKTTRNAKEIINKDIAYTVTAEDIRRELGISL 63

Query: 187 L-DDIEEERELKQMDYNAKCKACQHLGLAYVARQIRSADEGQTIFYTCPVCAHKQTE 354
             +  +EE EL ++     C+ CQH  L Y  RQ RSADEGQT +YTCP CAH+ TE
Sbjct: 64  FGEKTQEEAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score =  121 bits (304), Expect = 5e-26
 Identities = 57/117 (48%), Positives = 78/117 (66%)
 Frame = +1

Query: 7   SHQRDFMFCEMCGTMLSFDTPEYARCPLCKFQKRLKEIAGKVIRYTISGEDLRRELGVSS 186
           S + DF+FC +CGTML+  + EYA+CPLCK ++ +++I  K I +TIS ED+RRELG   
Sbjct: 3   SSRLDFLFCNLCGTMLTVPSTEYAQCPLCKTRRDIQDICDKEISFTISDEDIRRELG--- 59

Query: 187 LDDIEEERELKQMDYNAKCKACQHLGLAYVARQIRSADEGQTIFYTCPVCAHKQTEN 357
           ++ IEE   ++    + KC+ C H    Y  RQ+RSADEGQT FYTC  C H+  EN
Sbjct: 60  MEIIEEHAVMEYSKVSKKCEKCGHGEATYYTRQMRSADEGQTTFYTCTGCGHQSQEN 116


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/117 (49%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
 Frame = +1

Query: 7   SHQRDFMFCEMCGTMLSFDTPEYARCPLCKFQKRLKEIAGKVIRYTISGEDLRRELGVSS 186
           S + +F+FC +CGTML   + +YA CP CK  +  K+I  K I YT+S ED+RRELG+S 
Sbjct: 4   SRESEFLFCNLCGTMLVLKSTKYAECPHCKTTRNAKDIIDKEIAYTVSAEDIRRELGISL 63

Query: 187 L-DDIEEERELKQMDYNAKCKACQHLGLAYVARQIRSADEGQTIFYTCPVCAHKQTE 354
             +  + E EL ++     C+ CQH  L Y  RQ RSADEGQT +YTCP CAH+ TE
Sbjct: 64  FGEKTQAEAELPKI--KKACEKCQHPELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118