BLASTX nr result

ID: Scutellaria23_contig00028063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028063
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]    72   5e-11
ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...    70   1e-10
ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arab...    68   7e-10
gb|AAB60733.1| F21M12.19 gene product [Arabidopsis thaliana]           67   2e-09
ref|NP_172451.2| tRNA pseudouridine synthase A [Arabidopsis thal...    67   2e-09

>emb|CAN72774.1| hypothetical protein VITISV_026284 [Vitis vinifera]
          Length = 812

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 EQLRNQQPESPHRPSKLAR---IGGGESPAIXXXXXXXXXXRNMAWNPRIQRYLIAIEYI 61
           + L N++ ESP RPSK+AR   +  GE              + M  NPR+QRYL+A+EYI
Sbjct: 631 KHLLNRRSESPQRPSKIARTDDLSDGEQQ-------DSVASKTMTQNPRVQRYLVAVEYI 683

Query: 60  GTRFSGAQQQASGRTVVGVL 1
           GTRFSG+QQQ + RTVVG L
Sbjct: 684 GTRFSGSQQQLNCRTVVGAL 703


>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = -3

Query: 231 EQLRNQQPESPHRPSKLAR---IGGGESPAIXXXXXXXXXXRNMAWNPRIQRYLIAIEYI 61
           + L N++ ESP RPSK+AR   +  GE              + M  NPR+QRYL+A+EYI
Sbjct: 19  KHLLNRRSESPQRPSKIARTDDLSDGEQQ-------DSVASKTMTQNPRVQRYLVAVEYI 71

Query: 60  GTRFSGAQQQASGRTVVGVL 1
           GTRFSG+QQQ + RTV G L
Sbjct: 72  GTRFSGSQQQLNCRTVAGAL 91


>ref|XP_002892526.1| hypothetical protein ARALYDRAFT_471082 [Arabidopsis lyrata subsp.
           lyrata] gi|297338368|gb|EFH68785.1| hypothetical protein
           ARALYDRAFT_471082 [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 46/93 (49%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
 Frame = -3

Query: 273 MTDEQSSPFAPRISEQLRNQQPESPHRPSKLARIGG--GESPAIXXXXXXXXXXRNMAWN 100
           M+D    P    +SE       ES  R SK+ARI G   E  A            N   N
Sbjct: 1   MSDNLKHPLDSTVSE-------ESLERLSKVARIEGFSDEEEAEEQQGLADSESMNPV-N 52

Query: 99  PRIQRYLIAIEYIGTRFSGAQQQASGRTVVGVL 1
           PR+QRYL+AIEYIGTRFSG+QQQA  RTVVGVL
Sbjct: 53  PRVQRYLVAIEYIGTRFSGSQQQAKDRTVVGVL 85


>gb|AAB60733.1| F21M12.19 gene product [Arabidopsis thaliana]
          Length = 250

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/69 (55%), Positives = 42/69 (60%)
 Frame = -3

Query: 207 ESPHRPSKLARIGGGESPAIXXXXXXXXXXRNMAWNPRIQRYLIAIEYIGTRFSGAQQQA 28
           ES  R SK+ARI G                     NPR+QRYL+AIEYIGTRFSG+QQQA
Sbjct: 16  ESLERLSKVARIEGFSDEESEEQQGLADLESMNPVNPRVQRYLVAIEYIGTRFSGSQQQA 75

Query: 27  SGRTVVGVL 1
             RTVVGVL
Sbjct: 76  KDRTVVGVL 84


>ref|NP_172451.2| tRNA pseudouridine synthase A [Arabidopsis thaliana]
           gi|332190374|gb|AEE28495.1| tRNA pseudouridine synthase
           A [Arabidopsis thaliana]
          Length = 372

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/69 (55%), Positives = 42/69 (60%)
 Frame = -3

Query: 207 ESPHRPSKLARIGGGESPAIXXXXXXXXXXRNMAWNPRIQRYLIAIEYIGTRFSGAQQQA 28
           ES  R SK+ARI G                     NPR+QRYL+AIEYIGTRFSG+QQQA
Sbjct: 16  ESLERLSKVARIEGFSDEESEEQQGLADLESMNPVNPRVQRYLVAIEYIGTRFSGSQQQA 75

Query: 27  SGRTVVGVL 1
             RTVVGVL
Sbjct: 76  KDRTVVGVL 84


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