BLASTX nr result

ID: Scutellaria23_contig00028013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00028013
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549104.1| PREDICTED: uncharacterized protein LOC100778...    67   1e-09
ref|XP_002318826.1| methyl binding domain protein [Populus trich...    62   5e-08
ref|XP_002321896.1| methyl binding domain protein [Populus trich...    60   1e-07

>ref|XP_003549104.1| PREDICTED: uncharacterized protein LOC100778412 [Glycine max]
          Length = 546

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = -3

Query: 206 GWKVDLKVRSFGRKDKYYTNLSNGLILNSRPEVLRYLESSEECWKPKR--PNKIRIEKVV 33
           GW V+++VR  G++DKYY   S+GL  NS+ EV RYL++++     ++  PN I +EK +
Sbjct: 13  GWTVEVRVRKNGKRDKYYFPPSSGLKFNSKVEVFRYLDNAQNKVSIQKISPNVI-VEKAI 71

Query: 32  AEDLPPGWIK 3
           AE LPPGW+K
Sbjct: 72  AEGLPPGWVK 81


>ref|XP_002318826.1| methyl binding domain protein [Populus trichocarpa]
           gi|222859499|gb|EEE97046.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 762

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/66 (48%), Positives = 40/66 (60%)
 Frame = -3

Query: 206 GWKVDLKVRSFGRKDKYYTNLSNGLILNSRPEVLRYLESSEECWKPKRPNKIRIEKVVAE 27
           GW+V++KVR+ G+KDK+Y   S G   NS+ EV RYL  S     P    K+ IEK V E
Sbjct: 13  GWRVEVKVRNNGKKDKFYFPPSGGCRFNSKIEVSRYLNGSH----PNSEQKVLIEKTVPE 68

Query: 26  DLPPGW 9
            LP GW
Sbjct: 69  GLPLGW 74


>ref|XP_002321896.1| methyl binding domain protein [Populus trichocarpa]
           gi|222868892|gb|EEF06023.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 243

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
 Frame = -3

Query: 206 GWKVDLKVRSFGRKDKYYTNLSNGLILNSRPEVLRYLESSEECWKPK-------RPNKIR 48
           GW+V++KVR+ G+KDK+Y   + G   NS+ EV RYL  S    + K         NK+ 
Sbjct: 13  GWRVEVKVRNSGKKDKFYFPPTGGFRFNSKIEVSRYLNGSHPKSEEKVGSNDQWSSNKVV 72

Query: 47  IEKVVAEDLPPGWIK 3
           IEK V E LP GW K
Sbjct: 73  IEKTVPEGLPLGWTK 87


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