BLASTX nr result

ID: Scutellaria23_contig00027894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027894
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26289.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana] ...    94   1e-17

>emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = -2

Query: 303 AQKAFEIFKDNREDGSGSVVYLYNSLIRANSVAGNFRDAIMLYVHMLVDGVGPDNYTFPF 124
           A+KAFE+FK++    S   +++ NSLIR  S AG  R+AI+LYV MLV GV P++YTFPF
Sbjct: 79  ARKAFELFKEDVR--SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPF 136

Query: 123 VLSACTKSLKLCEGRQLHGSVVKMGYCSDVFVSNSLVYCY 4
           VLS CTK    CEG Q+HGSVVKMG   DVF+ N L++ Y
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFY 176


>ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/100 (57%), Positives = 72/100 (72%)
 Frame = -2

Query: 303 AQKAFEIFKDNREDGSGSVVYLYNSLIRANSVAGNFRDAIMLYVHMLVDGVGPDNYTFPF 124
           A+KAFE+FK++    S   +++ NSLIR  S AG  R+AI+LYV MLV GV P++YTFPF
Sbjct: 79  ARKAFELFKEDVR--SDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPF 136

Query: 123 VLSACTKSLKLCEGRQLHGSVVKMGYCSDVFVSNSLVYCY 4
           VLS CTK    CEG Q+HGSVVKMG   DVF+ N L++ Y
Sbjct: 137 VLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFY 176


>ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/88 (55%), Positives = 66/88 (75%)
 Frame = -2

Query: 267 EDGSGSVVYLYNSLIRANSVAGNFRDAIMLYVHMLVDGVGPDNYTFPFVLSACTKSLKLC 88
           +DG+ + +++YN LIR  + AG    AI+LYV MLV G+ PD YTFPF+LSAC+K L L 
Sbjct: 88  DDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALS 147

Query: 87  EGRQLHGSVVKMGYCSDVFVSNSLVYCY 4
           EG Q+HG+V+KMG   D+FVSNSL++ Y
Sbjct: 148 EGVQVHGAVLKMGLEGDIFVSNSLIHFY 175


>ref|XP_002314675.1| predicted protein [Populus trichocarpa] gi|222863715|gb|EEF00846.1|
           predicted protein [Populus trichocarpa]
          Length = 845

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/101 (49%), Positives = 70/101 (69%)
 Frame = -2

Query: 303 AQKAFEIFKDNREDGSGSVVYLYNSLIRANSVAGNFRDAIMLYVHMLVDGVGPDNYTFPF 124
           AQKA E+F +  ++G     Y+++SLIR  S  G    AI+++  ++  G  PDN+TFPF
Sbjct: 87  AQKALELFIE--DNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPF 144

Query: 123 VLSACTKSLKLCEGRQLHGSVVKMGYCSDVFVSNSLVYCYG 1
           VLSACTKS  L EG Q+HG++VKMG+  D+FV NSL++ YG
Sbjct: 145 VLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYG 185


>ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332643144|gb|AEE76665.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 938

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 46/97 (47%), Positives = 65/97 (67%)
 Frame = -2

Query: 294 AFEIFKDNREDGSGSVVYLYNSLIRANSVAGNFRDAIMLYVHMLVDGVGPDNYTFPFVLS 115
           A E+F+++   G+    ++YNSLIR  + +G   +AI+L++ M+  G+ PD YTFPF LS
Sbjct: 86  AKEVFENSESYGT---CFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLS 142

Query: 114 ACTKSLKLCEGRQLHGSVVKMGYCSDVFVSNSLVYCY 4
           AC KS     G Q+HG +VKMGY  D+FV NSLV+ Y
Sbjct: 143 ACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFY 179


Top