BLASTX nr result

ID: Scutellaria23_contig00027807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027807
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   259   4e-67
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   248   1e-63
ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding prote...   247   2e-63
ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62
gb|AFK40642.1| unknown [Lotus japonicus]                              243   4e-62

>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  259 bits (662), Expect = 4e-67
 Identities = 132/191 (69%), Positives = 150/191 (78%), Gaps = 1/191 (0%)
 Frame = +1

Query: 1   VMAVEGRSKCFFSTGSFGNDTNNKDGADGSVGIGDDDFL-EKPEIQLQGVDPRKGWNFRG 177
           V+ V+  SK ++ST SF  D  + DG +G     D+D + EKP +QLQGVDPRKGW FRG
Sbjct: 20  VVGVQKNSKAWYSTVSF--DGGDGDGKNGEGEESDNDLVTEKPNLQLQGVDPRKGWGFRG 77

Query: 178 VHRAIICGKVGQAPIQKILRNXXXXXXXXXXXXXMFDQRTVGSNDLPKPAQWHRIAVHNP 357
           VH+AIICGKVGQAP+QKILRN             MFDQR +G  DLPKPAQWHRIAVHN 
Sbjct: 78  VHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQR-IGGKDLPKPAQWHRIAVHNE 136

Query: 358 MLGAYAVQQLVKNSSVYVEGDIETRVYNDSINGDIKSIPEICVRRDGRIRLIKAGESMSN 537
            LGAYAVQQLVKNSSVYVEGDIE RVYNDSING++K +PEIC+RRDGRIRLIK GES+SN
Sbjct: 137 PLGAYAVQQLVKNSSVYVEGDIEVRVYNDSINGEVKHVPEICIRRDGRIRLIKTGESISN 196

Query: 538 ISIDELREGLF 570
           IS+DELREGLF
Sbjct: 197 ISVDELREGLF 207


>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  248 bits (633), Expect = 1e-63
 Identities = 123/191 (64%), Positives = 149/191 (78%), Gaps = 1/191 (0%)
 Frame = +1

Query: 1   VMAVEGRSKCFFSTGSFGNDTNNKDGADGSVGIGDDDFL-EKPEIQLQGVDPRKGWNFRG 177
           V+ ++   K  +ST SF  +  N  G +  +    DDFL EKPE+Q+QGVDPRKGW FRG
Sbjct: 25  VVGLQRSFKTLYSTESFSGE--NDVGKNNELDEEFDDFLGEKPELQIQGVDPRKGWGFRG 82

Query: 178 VHRAIICGKVGQAPIQKILRNXXXXXXXXXXXXXMFDQRTVGSNDLPKPAQWHRIAVHNP 357
           VH+AIICGKVGQAP+QKILRN             MFDQR VG+ DLPKPAQWHRIAVHN 
Sbjct: 83  VHKAIICGKVGQAPVQKILRNGRTVTIFTVGTGGMFDQRIVGAKDLPKPAQWHRIAVHNE 142

Query: 358 MLGAYAVQQLVKNSSVYVEGDIETRVYNDSINGDIKSIPEICVRRDGRIRLIKAGESMSN 537
            LGAYAVQQL KNSSVYVEG+IETRVYNDSI+G++K+IPEIC+RRDG+IRL+ +G+++S+
Sbjct: 143 TLGAYAVQQLAKNSSVYVEGEIETRVYNDSISGEVKNIPEICIRRDGKIRLVTSGKNVSD 202

Query: 538 ISIDELREGLF 570
           IS D+LREGLF
Sbjct: 203 ISFDDLREGLF 213


>ref|XP_003536057.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial-like
           [Glycine max]
          Length = 217

 Score =  247 bits (630), Expect = 2e-63
 Identities = 125/173 (72%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
 Frame = +1

Query: 55  NDTNNKDGADGSVGIGDDDFL-EKPEIQLQGVDPRKGWNFRGVHRAIICGKVGQAPIQKI 231
           ND   K+  D       DDFL EKPE+QLQGVDP+KGW FRGVH+AIICGKVGQAP+QKI
Sbjct: 49  NDAPKKEALDEEF----DDFLGEKPELQLQGVDPKKGWGFRGVHKAIICGKVGQAPVQKI 104

Query: 232 LRNXXXXXXXXXXXXXMFDQRTVGSNDLPKPAQWHRIAVHNPMLGAYAVQQLVKNSSVYV 411
           LRN             MFDQR  G  DLPKPAQWHRIAVHN +LG YAVQQL KNSSVYV
Sbjct: 105 LRNGRNITIFTVGTGGMFDQRIQGPKDLPKPAQWHRIAVHNDILGTYAVQQLFKNSSVYV 164

Query: 412 EGDIETRVYNDSINGDIKSIPEICVRRDGRIRLIKAGESMSNISIDELREGLF 570
           EGDIETRVYNDSING++KSIPEICVRRDGRIRLIK GES+   S+DELREGLF
Sbjct: 165 EGDIETRVYNDSINGNVKSIPEICVRRDGRIRLIKNGESIDKTSLDELREGLF 217


>ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  243 bits (620), Expect = 3e-62
 Identities = 122/180 (67%), Positives = 143/180 (79%), Gaps = 1/180 (0%)
 Frame = +1

Query: 34  FSTGSFGNDTNNKDGADGSVGIGDDDFL-EKPEIQLQGVDPRKGWNFRGVHRAIICGKVG 210
           +ST SF +D  N++G +  V    DD L ++ E + QGVDPRKGW FRGVHRAIICGKVG
Sbjct: 37  YSTVSFNSD--NEEGKNDKVEEEFDDLLGDRRESRFQGVDPRKGWEFRGVHRAIICGKVG 94

Query: 211 QAPIQKILRNXXXXXXXXXXXXXMFDQRTVGSNDLPKPAQWHRIAVHNPMLGAYAVQQLV 390
           QAP+QKILRN             MFDQR +GS DLPKPAQWHRIAVHN  LGAYAVQQL 
Sbjct: 95  QAPVQKILRNGRTVTIFTVGTGGMFDQRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLA 154

Query: 391 KNSSVYVEGDIETRVYNDSINGDIKSIPEICVRRDGRIRLIKAGESMSNISIDELREGLF 570
           KNSSVYVEGDIE RVYNDSI+G++K+IPEICVRRDG+IRLI++GE++SNIS ++LREGLF
Sbjct: 155 KNSSVYVEGDIEIRVYNDSISGEVKNIPEICVRRDGKIRLIRSGENISNISFEDLREGLF 214


>gb|AFK40642.1| unknown [Lotus japonicus]
          Length = 220

 Score =  243 bits (619), Expect = 4e-62
 Identities = 122/176 (69%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = +1

Query: 46  SFGNDTNNKDGADGSVGIGDDDFLE-KPEIQLQGVDPRKGWNFRGVHRAIICGKVGQAPI 222
           S GN   N +  D  +    DDFL  KPE+QLQGVDP++GW FRGVH+AIICGKVGQAP+
Sbjct: 49  SRGNGGLNNEELDEEI----DDFLGGKPELQLQGVDPKRGWGFRGVHKAIICGKVGQAPV 104

Query: 223 QKILRNXXXXXXXXXXXXXMFDQRTVGSNDLPKPAQWHRIAVHNPMLGAYAVQQLVKNSS 402
           QKILRN             M DQR VG+ D+PKP QWHRIAVHN +LGAYAVQQ+ KNSS
Sbjct: 105 QKILRNGKNVTIFTVGTGGMSDQRIVGARDMPKPPQWHRIAVHNDVLGAYAVQQICKNSS 164

Query: 403 VYVEGDIETRVYNDSINGDIKSIPEICVRRDGRIRLIKAGESMSNISIDELREGLF 570
           VYVEGDIETRVYNDSING++KSIPEICVRRDG+IRLIK+GES   IS+DELREGLF
Sbjct: 165 VYVEGDIETRVYNDSINGEVKSIPEICVRRDGKIRLIKSGESADKISLDELREGLF 220


Top