BLASTX nr result

ID: Scutellaria23_contig00027753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027753
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   168   8e-40
gb|ACU18813.1| unknown [Glycine max]                                  168   8e-40
ref|XP_002534099.1| ring finger protein, putative [Ricinus commu...   164   1e-38
ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like...   163   2e-38
ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like...   162   3e-38

>ref|XP_003545702.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 385

 Score =  168 bits (425), Expect = 8e-40
 Identities = 85/159 (53%), Positives = 104/159 (65%), Gaps = 11/159 (6%)
 Frame = +3

Query: 144 DQQKPH-VSTVLILMLCILALAFFILSYLTV-ARYRFRRRNSEALEISR---------AD 290
           DQ   H +ST L L L +L  AFF++    +  R+  RRR S                 D
Sbjct: 64  DQAYNHKISTYLFLALALLTAAFFVVCCRAIYTRFSSRRRVSSTSRRQNQTHHDDDDFVD 123

Query: 291 ENQGPVLDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLL 470
           E  GP++DHPIWYIRT+G  QS+I++I    YKKG+GLIEG DC++CLS+FQ+DE LRLL
Sbjct: 124 EENGPMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEGTDCAVCLSEFQEDENLRLL 183

Query: 471 PKCSHAFHVGCIDTWLRSHKNCPVCRAPIVIATTTASNE 587
           PKC HAFH+ CIDTWLRSH NCP+CRAPIV    TA  E
Sbjct: 184 PKCHHAFHLPCIDTWLRSHTNCPMCRAPIVADLATARME 222


>gb|ACU18813.1| unknown [Glycine max]
          Length = 385

 Score =  168 bits (425), Expect = 8e-40
 Identities = 85/159 (53%), Positives = 104/159 (65%), Gaps = 11/159 (6%)
 Frame = +3

Query: 144 DQQKPH-VSTVLILMLCILALAFFILSYLTV-ARYRFRRRNSEALEISR---------AD 290
           DQ   H +ST L L L +L  AFF++    +  R+  RRR S                 D
Sbjct: 64  DQAYNHKISTYLFLALALLTAAFFVVCCRAIYTRFSSRRRVSSTSRRQNQTHHDDDDFVD 123

Query: 291 ENQGPVLDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLL 470
           E  GP++DHPIWYIRT+G  QS+I++I    YKKG+GLIEG DC++CLS+FQ+DE LRLL
Sbjct: 124 EENGPMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEGTDCAVCLSEFQEDENLRLL 183

Query: 471 PKCSHAFHVGCIDTWLRSHKNCPVCRAPIVIATTTASNE 587
           PKC HAFH+ CIDTWLRSH NCP+CRAPIV    TA  E
Sbjct: 184 PKCHHAFHLPCIDTWLRSHTNCPMCRAPIVADLATARME 222


>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
           gi|223525847|gb|EEF28281.1| ring finger protein,
           putative [Ricinus communis]
          Length = 344

 Score =  164 bits (414), Expect = 1e-38
 Identities = 78/127 (61%), Positives = 94/127 (74%), Gaps = 6/127 (4%)
 Frame = +3

Query: 198 ALAFFILSYLTVARYRFRRRNSEALEISRA------DENQGPVLDHPIWYIRTVGFPQSL 359
           A+   IL+ +  AR R   R+     I  A      DE+QGP LDHPIWYI TVG  QS+
Sbjct: 11  AILVCILATILRARNRISTRSRSLPPIIFATQEDFLDEDQGPQLDHPIWYINTVGLQQSV 70

Query: 360 IDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLPKCSHAFHVGCIDTWLRSHKNCP 539
           IDSIA F YKK +GLIEG +CS+CL++FQ+DE LRLLPKCSHAFH+ CIDTWLRSHKNCP
Sbjct: 71  IDSIAVFKYKKDEGLIEGTECSVCLNEFQEDESLRLLPKCSHAFHIPCIDTWLRSHKNCP 130

Query: 540 VCRAPIV 560
           +CRAP++
Sbjct: 131 LCRAPVI 137


>ref|XP_003531535.1| PREDICTED: RING-H2 finger protein ATL54-like [Glycine max]
          Length = 403

 Score =  163 bits (412), Expect = 2e-38
 Identities = 83/161 (51%), Positives = 106/161 (65%), Gaps = 15/161 (9%)
 Frame = +3

Query: 144 DQQKPH-VSTVLILMLCILALAFFILSYLTV-ARYRFRRRNSEALEISRA---------- 287
           DQ   H +ST L L L +L  AFF++S   +  R+  RRR S      R           
Sbjct: 74  DQAYNHKISTYLFLALALLTAAFFVVSCRAIYTRFSSRRRVSSPSTSRRQTQTHHDDDDF 133

Query: 288 ---DENQGPVLDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEV 458
              +E+ G ++DHPIWYIRT+G  QS+I++I    YKKG+GLIEG DC++CLS+FQ+DE 
Sbjct: 134 VDDEEHHGRMVDHPIWYIRTLGLQQSIINAITVCKYKKGEGLIEGTDCAVCLSEFQEDEN 193

Query: 459 LRLLPKCSHAFHVGCIDTWLRSHKNCPVCRAPIVIATTTAS 581
           LRLLPKC HAFH+ CIDTWLRSH NCP+CRAPIV    ++S
Sbjct: 194 LRLLPKCQHAFHLPCIDTWLRSHTNCPMCRAPIVAEIESSS 234


>ref|XP_004155494.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
          Length = 360

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/156 (50%), Positives = 105/156 (67%), Gaps = 12/156 (7%)
 Frame = +3

Query: 150 QKPH-VSTVLILMLCILALAFF-ILSYLTVARYRFRRRNSEAL----------EISRADE 293
           + PH +S ++   + +L+  F  +L Y   AR+   RR    L          +    DE
Sbjct: 66  KSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDE 125

Query: 294 NQGPVLDHPIWYIRTVGFPQSLIDSIASFTYKKGDGLIEGNDCSICLSDFQDDEVLRLLP 473
            QGPVLDHPIWYIRT+G P ++ID+IA   +K G+GLI+G +CS+CLS+F++DE LRLLP
Sbjct: 126 EQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLP 185

Query: 474 KCSHAFHVGCIDTWLRSHKNCPVCRAPIVIATTTAS 581
           KCSHAFH+ CIDTWLRSH NCP+CRAP+V  +  A+
Sbjct: 186 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAA 221


Top