BLASTX nr result

ID: Scutellaria23_contig00027730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027730
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...   102   2e-20
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit...    93   3e-17
ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro...    91   1e-16
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg...    89   4e-16

>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score =  102 bits (255), Expect = 2e-20
 Identities = 59/92 (64%), Positives = 63/92 (68%)
 Frame = -1

Query: 277 MASTFIGMSSVGSFATPGGSRVTDDKLAVLSNKLXXXXXXXXXSFARRQNAIAHKTRSYR 98
           MAS F  MSSVGS A PGG R  D KLA  S++L         SF RRQN +  +TRS R
Sbjct: 1   MASAFTTMSSVGSLAAPGG-RGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTRSPR 59

Query: 97  ITAAKKDLYFNKDGSAIKKLQIGVNKLADLVG 2
           I A  KDLYFNKDGSAIKKLQ GVNKLADLVG
Sbjct: 60  INAMAKDLYFNKDGSAIKKLQTGVNKLADLVG 91


>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 605

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/92 (56%), Positives = 59/92 (64%)
 Frame = -1

Query: 277 MASTFIGMSSVGSFATPGGSRVTDDKLAVLSNKLXXXXXXXXXSFARRQNAIAHKTRSYR 98
           MASTF  MSSVGS   P      D K A  SN+L         +F RRQN +  ++RS +
Sbjct: 1   MASTFTAMSSVGSLVAPN----VDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSRSPK 56

Query: 97  ITAAKKDLYFNKDGSAIKKLQIGVNKLADLVG 2
           I A  KDL+FNKDGSAIKKLQ GVNKLADLVG
Sbjct: 57  ICAMAKDLHFNKDGSAIKKLQTGVNKLADLVG 88


>ref|XP_002303983.1| predicted protein [Populus trichocarpa] gi|222841415|gb|EEE78962.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 52/92 (56%), Positives = 60/92 (65%)
 Frame = -1

Query: 277 MASTFIGMSSVGSFATPGGSRVTDDKLAVLSNKLXXXXXXXXXSFARRQNAIAHKTRSYR 98
           MASTF  MSSVG+ A P G RV D K    SNKL          F R QN +  ++R  +
Sbjct: 1   MASTFTAMSSVGTLAAPNG-RVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSRPLK 59

Query: 97  ITAAKKDLYFNKDGSAIKKLQIGVNKLADLVG 2
           + AAK +L+FNKDGSAIKKLQ GVNKLADLVG
Sbjct: 60  VNAAK-ELHFNKDGSAIKKLQTGVNKLADLVG 90


>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 50/92 (54%), Positives = 63/92 (68%)
 Frame = -1

Query: 277 MASTFIGMSSVGSFATPGGSRVTDDKLAVLSNKLXXXXXXXXXSFARRQNAIAHKTRSYR 98
           MASTF  MSS+G+ A PG SRV D KL   S+KL         +  +RQ+ +  + RS +
Sbjct: 1   MASTFTAMSSIGTLAAPG-SRVMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSK 59

Query: 97  ITAAKKDLYFNKDGSAIKKLQIGVNKLADLVG 2
           I+A  K+L+FN+DGSAIKKLQ GVNKLADLVG
Sbjct: 60  ISAMAKELHFNQDGSAIKKLQNGVNKLADLVG 91


>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
           protein subunit beta, chloroplastic-like [Cucumis
           sativus]
          Length = 608

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/92 (53%), Positives = 62/92 (67%)
 Frame = -1

Query: 277 MASTFIGMSSVGSFATPGGSRVTDDKLAVLSNKLXXXXXXXXXSFARRQNAIAHKTRSYR 98
           MASTF  MSS+G+ A PG SR  D KL   S+KL         +  +RQ+ +  + RS +
Sbjct: 1   MASTFTAMSSIGTLAAPG-SRAMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNRSSK 59

Query: 97  ITAAKKDLYFNKDGSAIKKLQIGVNKLADLVG 2
           I+A  K+L+FN+DGSAIKKLQ GVNKLADLVG
Sbjct: 60  ISAMAKELHFNQDGSAIKKLQNGVNKLADLVG 91


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