BLASTX nr result

ID: Scutellaria23_contig00027729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027729
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...    68   9e-10
ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 ...    67   1e-09
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li...    65   6e-09
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...    62   5e-08

>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 48/116 (41%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
 Frame = -3

Query: 304  RQLQKELIYDIQKYESMRAKTDAA---ATMQRSEPFQSPHATKKVQR------------- 173
            +QLQKELIYD+QKYES  AK  AA   ATMQ+   F SP   K   R             
Sbjct: 1179 KQLQKELIYDMQKYESNEAKITAAQAVATMQKPSSFLSPGVPKTANRTAQGQNKFPDNLH 1238

Query: 172  -DSKXXXXXXXXXXXXXARSVLRDVNNGGST-PLSTMNVPKLKTRTAEVGKSAGRP 11
             D++             ARSVL++VN G  T PLS ++VPKLK+     G    RP
Sbjct: 1239 NDARVASAMADATAAARARSVLKEVNKGSLTPPLSAISVPKLKSNQGASGAQNDRP 1294


>ref|XP_004152964.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit D3-like,
            partial [Cucumis sativus]
          Length = 929

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 15/102 (14%)
 Frame = -3

Query: 304  RQLQKELIYDIQKYESMRAKT---DAAATMQRSEPFQSPHA-----------TKKVQRDS 167
            +QLQKE +YDIQ+YES +AK+   +A   MQ+S  + SP A           T K+Q DS
Sbjct: 798  KQLQKESLYDIQRYESTKAKSAVAEAVNEMQKSTNYLSPEAPPQAVSVLNNLTSKLQNDS 857

Query: 166  KXXXXXXXXXXXXXARSVLRDVNNGGST-PLSTMNVPKLKTR 44
            K             A+SVLR+VN G ST PL + ++PKLK+R
Sbjct: 858  KVASAIADAAAAATAKSVLREVNRGTSTPPLGSRSLPKLKSR 899


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
 Frame = -3

Query: 304  RQLQKELIYDIQKYESMRAKTDAA---ATMQRSEPFQSPHATKKV-------------QR 173
            +QLQKELIYD+QKYE+ +AK+ AA   A+MQ    F SP A+K               Q 
Sbjct: 1139 KQLQKELIYDMQKYETSKAKSAAAVVVASMQNHSSFLSPGASKTAGGTKAQDNLNENPQS 1198

Query: 172  DSKXXXXXXXXXXXXXARSVLRDVNNGGST-PLSTMNVPKLKTRTAEVGKSAGRP 11
            DS+              RSVLR+VN G +T PLS+++ PKLK      G    RP
Sbjct: 1199 DSRVASAMANAVAEARVRSVLREVNRGIATPPLSSISRPKLKPNQDGTGARTDRP 1253


>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
          Length = 1345

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 5/101 (4%)
 Frame = -3

Query: 304  RQLQKELIYDIQKYESMRAKTDAAATMQRSEP-FQSPHATKKVQR---DSKXXXXXXXXX 137
            +QLQKELIYD++KY++ +AK+ AAA +   +P ++SPH +K  +R    S+         
Sbjct: 1222 KQLQKELIYDMEKYDAAKAKSTAAAAVATMQPCYRSPHVSKFTERLPVQSRVASAMSDAV 1281

Query: 136  XXXXARSVLRDVNNGGST-PLSTMNVPKLKTRTAEVGKSAG 17
                 RSVL++VN G  T P S++  PKLK+       S G
Sbjct: 1282 AAATVRSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSSRG 1322


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 19/107 (17%)
 Frame = -3

Query: 304  RQLQKELIYDIQKYESMRAK---TDAAATMQRSEPFQSPHATKKVQR------------- 173
            +QLQKELIYDI+KYE+ +AK    +A  T  +S   QSP A+K + +             
Sbjct: 1200 KQLQKELIYDIKKYEAAKAKATVAEAVGTKPKSVSNQSPDASKNLTKTQGQTVGQSSNEL 1259

Query: 172  --DSKXXXXXXXXXXXXXARSVLRDVNNGGSTP-LSTMNVPKLKTRT 41
              DS+             ARSVLR++N G +TP LS+++VPK+K+ T
Sbjct: 1260 PSDSRVASAMANAAAAATARSVLREINKGTATPSLSSLSVPKVKSCT 1306


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