BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027712
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002884507.1| pentatricopeptide repeat-containing protein ...    92   4e-17
ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...    91   1e-16
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...    90   2e-16

>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/101 (49%), Positives = 66/101 (65%)
 Frame = +1

Query: 127 LSALLSSCGRQGNFRLGSCLHAYIVKSXXXXXXXXXXXXXXAHVIYNSLLHVYCKSGELR 306
           +S LLS CGR+G   LGS LHA I+K+                V++NSLL +Y + GELR
Sbjct: 47  ISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELR 106

Query: 307 DAVKLFDDMPLRDTVSWNSLISGFLRVGNLKMGFSYFKLLF 429
           DA K+FD MP++DT+SWNS ISG L  G+++MGF  FK L+
Sbjct: 107 DATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLY 147



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/89 (34%), Positives = 50/89 (56%)
 Frame = +1

Query: 127 LSALLSSCGRQGNFRLGSCLHAYIVKSXXXXXXXXXXXXXXAHVIYNSLLHVYCKSGELR 306
           +SA+L   G   +  LG  +H+ I+K                + + N L+++Y K G+L 
Sbjct: 361 ISAILGVFGIDTSLALGKQIHSLIIKKSFGSN----------YFVNNGLINMYSKCGDLD 410

Query: 307 DAVKLFDDMPLRDTVSWNSLISGFLRVGN 393
           D++K+F  MP R++VSWNS+I+ F R GN
Sbjct: 411 DSIKIFCWMPQRNSVSWNSMIAAFARHGN 439


>ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330347|gb|EFH60766.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 676

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 9/146 (6%)
 Frame = +1

Query: 22  ILQKL------CFPSSLRPWRCYPTSSFSFYSKVSTDSFTH--LSALLSSCGRQGNFR-L 174
           ++QKL      CF + L P +     S S+  +VST    H  +S LLS CGR+G F  L
Sbjct: 6   VIQKLTSHLPSCFSTVLSPSKILIRQSPSY--QVSTFLLNHVDMSLLLSICGREGWFPYL 63

Query: 175 GSCLHAYIVKSXXXXXXXXXXXXXXAHVIYNSLLHVYCKSGELRDAVKLFDDMPLRDTVS 354
           G CLHA IVK+              A V++NSLL +Y K G+L DA+KLFD+MP+RD +S
Sbjct: 64  GPCLHASIVKNPEFFDPVDADIHRNALVVWNSLLSLYVKCGKLGDALKLFDEMPVRDVIS 123

Query: 355 WNSLISGFLRVGNLKMGFSYFKLLFG 432
            N +  GFLR    + GF   K + G
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLG 149


>ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cucumis sativus]
          Length = 838

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/113 (50%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
 Frame = +1

Query: 106 STDSFTHL--SALLSSCGRQGNFRLGSCLHAYIVKSXXXXXXXXXXXXXXAHVIYNSLLH 279
           ST    HL  S LLS CGR+GN  LGS LHA I+KS                VI NSL+ 
Sbjct: 39  STFVLNHLDPSFLLSICGREGNLHLGSSLHASIIKSFELSNHYNGV------VIMNSLIS 92

Query: 280 VYCKSGELRDAVKLFDDMPLRDTVSWNSLISGFLRVGNLKMGFSYFKLLFGCV 438
           +Y + G+L DAVK+FD+M  RDT+SWN+LI GF+R GN     SYFK   GCV
Sbjct: 93  MYDRCGKLPDAVKVFDEMITRDTISWNALIGGFVRNGN-----SYFKC--GCV 138


>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
 Frame = +1

Query: 34  LCFPSSLRPWRCYPTSSFSFYSKV-STDSFTHLSALLSSCGRQGNFRLGSCLHAYIVKSX 210
           L  P +++P    P S + F S   S  +   L++LL+ CGR  N  LGS +HA I+K  
Sbjct: 9   LNLPFNIKP----PHSQYLFPSTTKSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQP 64

Query: 211 XXXXXXXXXXXXXAHVIYNSLLHVYCKSGELRDAVKLFDDMPLRDTVSWNSLISGFLRVG 390
                        A  I+NSLL +Y K GE R+A  +FD MP+RDTVSWN++ISGFLR G
Sbjct: 65  PSFDFDGSQRN--ALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNG 122

Query: 391 NLKMGFSYFK 420
           +    F +FK
Sbjct: 123 DFDTSFKFFK 132


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 58/146 (39%), Positives = 80/146 (54%), Gaps = 9/146 (6%)
 Frame = +1

Query: 22  ILQKL------CFPSSLRPWRCYPTSSFSFYSKVSTDSFTH--LSALLSSCGRQGNF-RL 174
           ++QKL      C  + L P +     S ++  +VST    H  +S LLS CGR+G F  L
Sbjct: 6   VIQKLTSHLPSCLSTVLSPSKILIRQSPNY--QVSTFLLNHVDMSLLLSICGREGWFPHL 63

Query: 175 GSCLHAYIVKSXXXXXXXXXXXXXXAHVIYNSLLHVYCKSGELRDAVKLFDDMPLRDTVS 354
           G CLHA I+K+              A V++NSLL +Y K G+L DA+KLFD+MP+RD +S
Sbjct: 64  GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123

Query: 355 WNSLISGFLRVGNLKMGFSYFKLLFG 432
            N +  GFLR    + GF   K + G
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLG 149