BLASTX nr result

ID: Scutellaria23_contig00027574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027574
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   170   1e-40
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   170   1e-40
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   166   1e-39
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...   164   7e-39

>ref|XP_002331832.1| predicted protein [Populus trichocarpa] gi|222875070|gb|EEF12201.1|
           predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/119 (73%), Positives = 98/119 (82%), Gaps = 4/119 (3%)
 Frame = -2

Query: 347 TADNSAEGLKKLEYLSLVSKVCTELETHLGFGDKVLAEFITEMGRNCETVDEFDAKLKEN 168
           TA  +  GLKKLEYLSLVSKVC+ELETHLGFGDK+LAEFITE+GR+CETVDEFDAKLKEN
Sbjct: 3   TAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKEN 62

Query: 167 GAEMPDYFVRTLLTIIHAILPPKLKSKSDKVSKEEGEA----FSALKIKDGRARVKELE 3
           GAEMPDYFVRTLLTIIHAILPPK + +  K  + +G      F AL IKD R RVKE++
Sbjct: 63  GAEMPDYFVRTLLTIIHAILPPKAEKEVKKDMEGDGSGKDSKFKALSIKDSRDRVKEID 121


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  170 bits (430), Expect = 1e-40
 Identities = 88/120 (73%), Positives = 97/120 (80%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MTADNSAEGLKKLEYLSLVSKVCTELETHLGFGDKVLAEFITEMGRNCETVDEFDAKLKE 171
           M+ D   +GLKKLEYLSLVSKVCTELETHLG GDKVLAEFIT+MGR CETVDEFD+KLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 170 NGAEMPDYFVRTLLTIIHAILPPKLKSKSDKVSKEEGEA----FSALKIKDGRARVKELE 3
           NGAEMPDYFVRTLLTIIHAILPPK KS    + K+ G+     F AL I D + RV+ELE
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELE 120


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  170 bits (430), Expect = 1e-40
 Identities = 88/120 (73%), Positives = 97/120 (80%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MTADNSAEGLKKLEYLSLVSKVCTELETHLGFGDKVLAEFITEMGRNCETVDEFDAKLKE 171
           M+ D   +GLKKLEYLSLVSKVCTELETHLG GDKVLAEFIT+MGR CETVDEFD+KLKE
Sbjct: 1   MSVDAQNDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKE 60

Query: 170 NGAEMPDYFVRTLLTIIHAILPPKLKSKSDKVSKEEGEA----FSALKIKDGRARVKELE 3
           NGAEMPDYFVRTLLTIIHAILPPK KS    + K+ G+     F AL I D + RV+ELE
Sbjct: 61  NGAEMPDYFVRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVRELE 120


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  166 bits (421), Expect = 1e-39
 Identities = 84/120 (70%), Positives = 98/120 (81%), Gaps = 4/120 (3%)
 Frame = -2

Query: 350 MTADNSAEGLKKLEYLSLVSKVCTELETHLGFGDKVLAEFITEMGRNCETVDEFDAKLKE 171
           + A  +  GLKKLEYLSLVSKVC+ELETHLGFGDK+LAEFITE+GR+C+TVDEFDAKLKE
Sbjct: 2   VAAGENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKE 61

Query: 170 NGAEMPDYFVRTLLTIIHAILPPKLKSKSDKVSKEEGEA----FSALKIKDGRARVKELE 3
           NGAEMPDYFVRTLLTIIHAILPPK + +  K  + +G      F AL I+D R RVKE++
Sbjct: 62  NGAEMPDYFVRTLLTIIHAILPPKAEKEVKKDMEGDGSGKDSKFKALSIQDSRDRVKEID 121


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score =  164 bits (415), Expect = 7e-39
 Identities = 88/118 (74%), Positives = 96/118 (81%), Gaps = 6/118 (5%)
 Frame = -2

Query: 338 NSAEGLKKLEYLSLVSKVCTELETHLGFGDKVLAEFITEMGRNCETVDEFDAKLKENGAE 159
           N  +GLKKLEYLSLVSKVC+ELETHLGFGDKVLAEFITEMGR+CETVDEFDAKLKENGAE
Sbjct: 7   NGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAE 66

Query: 158 MPDYFVRTLLTIIHAILPPKLKSKSDKVSKEEGEA------FSALKIKDGRARVKELE 3
           MPDYFVR+LL IIH ILPP+ K  S+K  K+E E+      F AL I D R R KELE
Sbjct: 67  MPDYFVRSLLRIIHLILPPQ-KGDSEKELKKEKESDGKKGKFRALAIGDDRERAKELE 123


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