BLASTX nr result

ID: Scutellaria23_contig00027560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027560
         (1018 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              242   9e-62
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  237   4e-60
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]   236   7e-60
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  235   1e-59
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         234   3e-59

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  242 bits (618), Expect = 9e-62
 Identities = 130/308 (42%), Positives = 182/308 (59%), Gaps = 5/308 (1%)
 Frame = +1

Query: 4    DSIFVVVDRFSKMVHFIACMRTTDALAVAQLYFRDIYCLHGLPISIVSDRDTRFLSHFWR 183
            DSIFVVVDRFSKM HFI C +T DA+ +A L+FR++  LHG+P +IVSDRDT+FLS+FW+
Sbjct: 1474 DSIFVVVDRFSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWK 1533

Query: 184  SLWRMVHTSLNFSSAYHPQIDGQTEVVNRSLGNLLRALVGEHIKTWDTKLPQAEFAHNCA 363
            +LW  + T L FS+  HPQ DGQTEVVNR+L  LLRAL+ +++KTW+  LP  EFA+N +
Sbjct: 1534 TLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHS 1593

Query: 364  VNRSTRFSPFQVVYGXXXXXXXXXXXXXXATRPHGVAADFVNEIHQVHQLVH*NLVAITS 543
            ++ +++FSPFQ+VYG              + R           + Q+H+    N+   T 
Sbjct: 1594 MHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTK 1653

Query: 544  HYKTHINRGRREVLFDVSDYVWAILTKDRFPAHEYNKLKA*KIGPIEIVDRINPNAYRLK 723
             Y  H N+ R+EV+F+  D VW  L K+RFP    +KL +   GP +++ RIN NAY L 
Sbjct: 1654 QYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSKLMSRIDGPFKVLKRINNNAYSLD 1713

Query: 724  LPSHIHTSDVFNVKHLIPYLGXXXXXXXXXXXRANPPNPGGDYV-----DHMALAYLERL 888
            L    + S+ FNV  L P++            R+NP   G D V     DH A   +  L
Sbjct: 1714 LQGKYNVSNSFNVADLFPFIA------DNTDLRSNPFQLGEDDVIMTSLDHGADEIMTSL 1767

Query: 889  EKTEDYLV 912
            +   D ++
Sbjct: 1768 DHGADEIM 1775


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  237 bits (604), Expect = 4e-60
 Identities = 121/261 (46%), Positives = 166/261 (63%)
 Frame = +1

Query: 4    DSIFVVVDRFSKMVHFIACMRTTDALAVAQLYFRDIYCLHGLPISIVSDRDTRFLSHFWR 183
            DSIFVVVDRFSKM HFI C ++ DA  VA L+FR+I  LHG+P +IVSDRD +FLSHFWR
Sbjct: 1342 DSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWR 1401

Query: 184  SLWRMVHTSLNFSSAYHPQIDGQTEVVNRSLGNLLRALVGEHIKTWDTKLPQAEFAHNCA 363
             LW  + T L FS+  HPQ DGQTEVVNRSL  +LRA++  +IK W+  LP  EFA+N +
Sbjct: 1402 CLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRS 1461

Query: 364  VNRSTRFSPFQVVYGXXXXXXXXXXXXXXATRPHGVAADFVNEIHQVHQLVH*NLVAITS 543
            ++ +T+  PF++VYG              + + +  A +    I ++H+L   N+  + +
Sbjct: 1462 LHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNA 1521

Query: 544  HYKTHINRGRREVLFDVSDYVWAILTKDRFPAHEYNKLKA*KIGPIEIVDRINPNAYRLK 723
             YK   ++GR+ V+F   D VW  L KDRFP    +KL     GP +++++IN NAYRL+
Sbjct: 1522 RYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLE 1581

Query: 724  LPSHIHTSDVFNVKHLIPYLG 786
            LP+    S  FN+  L PYLG
Sbjct: 1582 LPADFGVSPTFNIADLKPYLG 1602


>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score =  236 bits (602), Expect = 7e-60
 Identities = 125/288 (43%), Positives = 167/288 (57%), Gaps = 3/288 (1%)
 Frame = +1

Query: 1    FDSIFVVVDRFSKMVHFIACMRTTDALAVAQLYFRDIYCLHGLPISIVSDRDTRFLSHFW 180
            FDSIFVVVDRFSKM HFI C +T++A  V  L+F+++  LHGLP SIVS+RD +F+S+FW
Sbjct: 956  FDSIFVVVDRFSKMTHFIPCKKTSNASYVTALFFKEVVQLHGLPQSIVSNRDVKFMSYFW 1015

Query: 181  RSLWRMVHTSLNFSSAYHPQIDGQTEVVNRSLGNLLRALVGEHIKTWDTKLPQAEFAHNC 360
            ++LW  + T L FSS++HPQ DGQTEVVNRSLGNLLR +V + ++ WD  LPQAEFA N 
Sbjct: 1016 KTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIVRDQLRNWDNVLPQAEFAFNS 1075

Query: 361  AVNRSTRFSPFQVVYGXXXXXXXXXXXXXXATRPHGVAADFVNEIHQVHQLVH*NLVAIT 540
            + NR+T + PF+V YG              + R       F   I  +H+ V   +    
Sbjct: 1076 STNRTTGYLPFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHEKVREKIKISN 1135

Query: 541  SHYKTHINRGRREVLFDVSDYVWAILTKDRFPAHEYNKLKA*KIGPIEIVDRINPNAYRL 720
             +YK   +  RR + F     V   L  +RF    Y KL+A K GP  ++ R+  NAY L
Sbjct: 1136 ENYKEAXDAHRRYIQFQEGGLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLL 1195

Query: 721  KLPSHIHTSDVFNVKHLIPYLGXXXXXXXXXXXRANP---PNPGGDYV 855
            +LPS++  S +FNVK L  Y G           +  P   P P  +YV
Sbjct: 1196 ELPSNLXFSPIFNVKDLYIYHGHHNDVSEELDIQLPPTLSPRPEIEYV 1243


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  235 bits (599), Expect = 1e-59
 Identities = 120/261 (45%), Positives = 165/261 (63%)
 Frame = +1

Query: 4    DSIFVVVDRFSKMVHFIACMRTTDALAVAQLYFRDIYCLHGLPISIVSDRDTRFLSHFWR 183
            DSIFVVVDRFSKM HFI C ++ DA  VA L+FR+I  LHG+P +IVSDRD +FLSHFWR
Sbjct: 1339 DSIFVVVDRFSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWR 1398

Query: 184  SLWRMVHTSLNFSSAYHPQIDGQTEVVNRSLGNLLRALVGEHIKTWDTKLPQAEFAHNCA 363
             LW  + T L FS+  HPQ DGQTEVVNRSL  +LRA++  ++K W+  LP  EFA+N +
Sbjct: 1399 CLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRS 1458

Query: 364  VNRSTRFSPFQVVYGXXXXXXXXXXXXXXATRPHGVAADFVNEIHQVHQLVH*NLVAITS 543
            ++ +T+  PF++VYG              + + +  A +    I ++H+L   N+  + +
Sbjct: 1459 LHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNA 1518

Query: 544  HYKTHINRGRREVLFDVSDYVWAILTKDRFPAHEYNKLKA*KIGPIEIVDRINPNAYRLK 723
             YK   ++GR+ V+F   D VW  L KDRFP    +KL     GP +++++IN NAYRL+
Sbjct: 1519 RYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLE 1578

Query: 724  LPSHIHTSDVFNVKHLIPYLG 786
            LP     S  FN+  L PYLG
Sbjct: 1579 LPXDFGVSPTFNIADLKPYLG 1599


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  234 bits (597), Expect = 3e-59
 Identities = 117/261 (44%), Positives = 166/261 (63%)
 Frame = +1

Query: 4    DSIFVVVDRFSKMVHFIACMRTTDALAVAQLYFRDIYCLHGLPISIVSDRDTRFLSHFWR 183
            DS+FVVVDRFSKM HFI C +T DA  +A L+FR+I  LHG+P +IVSDRD +FLSHFWR
Sbjct: 1286 DSVFVVVDRFSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWR 1345

Query: 184  SLWRMVHTSLNFSSAYHPQIDGQTEVVNRSLGNLLRALVGEHIKTWDTKLPQAEFAHNCA 363
            +LW  + T L FS+  HPQ DGQTEVVNR+L  +LRA++ ++IK W+  LP  EFA+N +
Sbjct: 1346 TLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRS 1405

Query: 364  VNRSTRFSPFQVVYGXXXXXXXXXXXXXXATRPHGVAADFVNEIHQVHQLVH*NLVAITS 543
            ++ +T+  PFQ+VYG              + + +  A      + ++H+    N+  + +
Sbjct: 1406 LHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNA 1465

Query: 544  HYKTHINRGRREVLFDVSDYVWAILTKDRFPAHEYNKLKA*KIGPIEIVDRINPNAYRLK 723
             YK   ++GR+E+ F+  D VW  L K+RFP    +KL     GP +++++IN NAYRL 
Sbjct: 1466 RYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADGPFKVLEKINDNAYRLD 1525

Query: 724  LPSHIHTSDVFNVKHLIPYLG 786
            LP+    S  FN+  L PYLG
Sbjct: 1526 LPADFGVSPTFNIADLKPYLG 1546


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