BLASTX nr result

ID: Scutellaria23_contig00027470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027470
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...   121   5e-26
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...   114   1e-23
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...   109   2e-22
ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22

>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/96 (66%), Positives = 78/96 (81%)
 Frame = +2

Query: 2   LEDEIDLSQQIEAIRREVIQRKSMQDEGKEKDEDESILSAKRFDECNVSSLTVRALTEAG 181
           +++  D S+QIE IR E + RK++ +E +EK ++ESILS KRFDEC VS LTV+AL+ AG
Sbjct: 247 IDEGDDFSEQIELIRHE-LSRKNLAEE-EEKGDEESILSQKRFDECGVSPLTVKALSSAG 304

Query: 182 YVQMTRVQEATLSACLEGKDALVKARAGTGKSVAFL 289
           YVQMTRVQEATL  CLEGKDALVKA+ GTGKS AFL
Sbjct: 305 YVQMTRVQEATLDVCLEGKDALVKAKTGTGKSAAFL 340


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/99 (63%), Positives = 72/99 (72%), Gaps = 3/99 (3%)
 Frame = +2

Query: 2   LEDEIDLSQQIEAIRREVIQRKSMQDEGKEK---DEDESILSAKRFDECNVSSLTVRALT 172
           LE+E D     E IR E+  +  +    +EK   DE ESIL  +RFDEC +S LTV+ALT
Sbjct: 263 LEEETDF----EFIRYELENKMKLDRNDREKSEIDEQESILGQRRFDECGISPLTVKALT 318

Query: 173 EAGYVQMTRVQEATLSACLEGKDALVKARAGTGKSVAFL 289
            AGYVQMTRVQEATLSACLEGKDALVKA+ GTGKS AFL
Sbjct: 319 TAGYVQMTRVQEATLSACLEGKDALVKAKTGTGKSAAFL 357


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  112 bits (281), Expect = 2e-23
 Identities = 58/95 (61%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8   DEIDLSQQIEAIRREVIQRKSMQDEGKEKDEDESILSAKRFDECNVSSLTVRALTEAGYV 187
           D+ D + ++E IR E+ ++K       +K+E++SILS KRFDEC +S LTV+AL  AGYV
Sbjct: 290 DKNDFANEVELIRYELGRKKKFAGNEGDKEEEDSILSEKRFDECGLSPLTVKALIAAGYV 349

Query: 188 QMTRVQEATLSACLE-GKDALVKARAGTGKSVAFL 289
           QMTRVQEATLS CLE GKDA+VKA+ GTGKS AFL
Sbjct: 350 QMTRVQEATLSVCLEAGKDAMVKAKTGTGKSAAFL 384


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score =  109 bits (273), Expect = 2e-22
 Identities = 52/95 (54%), Positives = 77/95 (81%)
 Frame = +2

Query: 5   EDEIDLSQQIEAIRREVIQRKSMQDEGKEKDEDESILSAKRFDECNVSSLTVRALTEAGY 184
           ++E D ++Q+E +R E+ ++ + ++EG++++E   I + KRFDEC +S LTV+AL+ +GY
Sbjct: 307 DEESDFAEQVELLRYELSKKSAAEEEGEKREE--IIFTEKRFDECGISPLTVKALSFSGY 364

Query: 185 VQMTRVQEATLSACLEGKDALVKARAGTGKSVAFL 289
           V+MTRVQEATLS CLEGKD LVK++ G+GKSVAFL
Sbjct: 365 VRMTRVQEATLSLCLEGKDTLVKSKTGSGKSVAFL 399


>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score =  108 bits (271), Expect = 4e-22
 Identities = 55/92 (59%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
 Frame = +2

Query: 17  DLSQQIEAIRREVIQRKSMQDEGKEKDEDESILSAKRFDECNVSSLTVRALTEAGYVQMT 196
           D + ++E IR E+ ++K +     + ++++SILS KRFDEC +S LTV+ALT AGYVQMT
Sbjct: 279 DFANEVELIRYELGRKKKLAGNDGDNEDEDSILSDKRFDECGLSPLTVKALTAAGYVQMT 338

Query: 197 RVQEATLSACLE-GKDALVKARAGTGKSVAFL 289
           RVQEATLS CLE GKDA+VKA+ G GKS AFL
Sbjct: 339 RVQEATLSVCLEAGKDAMVKAKTGKGKSAAFL 370


Top