BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027440
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFI72624.1| Ycf1, partial [Gmelina arborea]                         97   2e-18
gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata]                  97   2e-18
gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]                     97   2e-18
ref|YP_007507170.1| photosystem I assembly protein Ycf1 (chlorop...    95   7e-18
gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]                94   9e-18

>gb|AFI72624.1| Ycf1, partial [Gmelina arborea]
          Length = 1526

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/61 (75%), Positives = 50/61 (81%)
 Frame = -1

Query: 343 PIF*ESYLMNTNENQDNSRFKIVDKKTKNKDFVFFDKPLVTILFDSKRWN*PFRFIKIQT 164
           PI  ESYLMN NENQDNSRFKI D+KT+NK F FFDKPLVT+LFDSKRWN P R+IK   
Sbjct: 1   PISEESYLMNINENQDNSRFKIFDEKTENKKFYFFDKPLVTLLFDSKRWNRPLRYIKNNQ 60

Query: 163 F 161
           F
Sbjct: 61  F 61


>gb|AFI72609.1| Ycf1, partial [Callicarpa pedunculata]
          Length = 1523

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = -1

Query: 343 PIF*ESYLMNTNENQDNSRFKIVDKKTKNKDFVFFDKPLVTILFDSKRWN*PFRFIKIQT 164
           P+  ESYL+N NENQDNSRF+I+DKKT+NKD  FFDKPLVT+LFDSKRWN PFR+IK   
Sbjct: 1   PVSEESYLININENQDNSRFQILDKKTENKDPFFFDKPLVTLLFDSKRWNRPFRYIKNNQ 60

Query: 163 F 161
           F
Sbjct: 61  F 61


>gb|AFI72608.1| Ycf1, partial [Callicarpa japonica]
          Length = 1523

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/61 (73%), Positives = 52/61 (85%)
 Frame = -1

Query: 343 PIF*ESYLMNTNENQDNSRFKIVDKKTKNKDFVFFDKPLVTILFDSKRWN*PFRFIKIQT 164
           P+  ESYL+N NENQDNSRF+I+DKKT+NKD  FFDKPLVT+LFDSKRWN PFR+IK   
Sbjct: 1   PVSEESYLININENQDNSRFQILDKKTENKDPFFFDKPLVTLLFDSKRWNRPFRYIKNNQ 60

Query: 163 F 161
           F
Sbjct: 61  F 61


>ref|YP_007507170.1| photosystem I assembly protein Ycf1 (chloroplast) [Salvia
           miltiorrhiza] gi|401879801|gb|AFQ30988.1| photosystem I
           assembly protein Ycf1 (chloroplast) [Salvia
           miltiorrhiza]
          Length = 1838

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 45/65 (69%), Positives = 52/65 (80%)
 Frame = -1

Query: 355 SKYRPIF*ESYLMNTNENQDNSRFKIVDKKTKNKDFVFFDKPLVTILFDSKRWN*PFRFI 176
           SK RP+  ESYLMN NENQ+NSRFKI D KT+NK   FFDKPL+T+LFDSK+WN PFR+I
Sbjct: 319 SKNRPVSEESYLMNINENQENSRFKINDSKTENKKPFFFDKPLITLLFDSKKWNRPFRYI 378

Query: 175 KIQTF 161
           K   F
Sbjct: 379 KNNHF 383


>gb|AFI72647.1| Ycf1, partial [Pseudocarpidium wrightii]
          Length = 1544

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -1

Query: 343 PIF*ESYLMNTNENQDNSRFKIVDKKTKNKDFVFFDKPLVTILFDSKRWN*PFRFIKIQT 164
           P+  E YL+N NENQDNSRFKI D+KT+NKD +FFDKPLVT+LFDSKRWN PFR+IK   
Sbjct: 1   PLSEEFYLVNINENQDNSRFKIFDEKTENKDSLFFDKPLVTLLFDSKRWNRPFRYIKNNH 60

Query: 163 F 161
           F
Sbjct: 61  F 61