BLASTX nr result

ID: Scutellaria23_contig00027418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027418
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp....    55   1e-12
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...    64   1e-08
emb|CAN63829.1| hypothetical protein VITISV_040311 [Vitis vinifera]    49   3e-08
emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]    63   3e-08
ref|XP_003545434.1| PREDICTED: uncharacterized protein LOC100801...    50   3e-08

>ref|XP_002883786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329626|gb|EFH60045.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 327

 Score = 55.5 bits (132), Expect(2) = 1e-12
 Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = -1

Query: 488 FRAFFKRSFDHSWFFTFHHDFVKTIFPIWFLEWWLSFGPLPIICPPEIQKA----HSYYM 321
           FR    R+FDHSWF +F       + P WF EWW  FGP   I P +I K     +S ++
Sbjct: 91  FRTLCLRAFDHSWFLSFDSRCPNQV-PGWFHEWWYWFGPTNEIYPTDIIKTNFPFYSKHL 149

Query: 320 SKSNIESFKRELF 282
            K +I+SFK   F
Sbjct: 150 PKQDIDSFKNISF 162



 Score = 42.0 bits (97), Expect(2) = 1e-12
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = -3

Query: 264 VPWILCWSFSFKQWKPKPFPISIVREFKVKWWQGYSEKYCNV-DVIKTFLSTGVKPKWDK 88
           +PWI  W ++     P   P S+VRE+++KWW  Y    C++ ++ K F  T       K
Sbjct: 168 IPWICSWHYNLILLLPG-MPYSLVREYRIKWWDKYDLNRCSLTNIAKLFQIT----SQTK 222

Query: 87  SSKDKISQPITPTHSHYIS 31
           +    +S+ I   H   +S
Sbjct: 223 AQVQAVSKSILYLHHKILS 241


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -3

Query: 303 IFQKRTLLF-AEFKVPWILCWSFSFKQWKPKPFPISIVREFKVKWWQGYSEKYCNVDVIK 127
           IFQ R L F +  ++PWIL W+   KQ +P PFP+S+ REF +KWW  ++  +     + 
Sbjct: 50  IFQPRLLTFCSRLRIPWILTWNIIKKQEQPLPFPLSLSREFSIKWWDKFNHDFVCQQKVL 109

Query: 126 TFLSTGVKPKWDKSSKDKISQPITPTHSHYIS 31
             ++T  +P    +SKD  S    PT   +++
Sbjct: 110 QLIAT--RP-GSSNSKDSTSSSQGPTQEEFLT 138


>emb|CAN63829.1| hypothetical protein VITISV_040311 [Vitis vinifera]
          Length = 572

 Score = 48.5 bits (114), Expect(2) = 3e-08
 Identities = 28/76 (36%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
 Frame = -1

Query: 488 FRAFF--KRSFDHSWFFTFHHDFVKTIFPIWFLEWWLSFGPLPIICPPEIQKAHSYYMSK 315
           F AF    R F HSW F F      + FP WF  WW+ +GP   I P  I      + S 
Sbjct: 364 FNAFLIQNRDFHHSWMFYFPSKNQLSSFPFWFYSWWIYYGPNIKILPKPILDGFELFRSS 423

Query: 314 SNIE----SFKRELFF 279
            NI     +F   LFF
Sbjct: 424 FNIPRELLAFPPLLFF 439



 Score = 34.3 bits (77), Expect(2) = 3e-08
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = -3

Query: 300 FQKRTLLFAEFKVPWILCWSFSFKQWKPKPFPISIVREFKVKWWQGYSEKYCNVDVIKTF 121
           F      F++F + WI+ W +     +   FP S+ R FK KWW        + + +K +
Sbjct: 433 FPPLLFFFSKFGLAWIVQWDYIIITDESAAFP-SLGRTFKTKWWDALKND-ASTEAVKQY 490

Query: 120 LSTGVKPKWDKSSKDKISQ 64
               +K     S+ D +SQ
Sbjct: 491 F---LKNPSQVSASDDMSQ 506


>emb|CAN83211.1| hypothetical protein VITISV_010890 [Vitis vinifera]
          Length = 419

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = -3

Query: 303 IFQKRTLLF-AEFKVPWILCWSFSFKQWKPKPFPISIVREFKVKWWQGYSEKYCNVDVIK 127
           I Q R L F +  ++PWIL W+   KQ +P PFP+S+ REF +KWW  ++  +     + 
Sbjct: 267 INQPRLLTFCSRLRIPWILTWNIIKKQEQPLPFPLSLSREFSIKWWDKFNHDFVCQQKVL 326

Query: 126 TFLSTGVKPKWDKSSKDKISQPITPTHSHYIS 31
             +ST  +P    +SKD  S    PT   +++
Sbjct: 327 QLIST--RPS-SSNSKDSTSSSQGPTQEEFLT 355



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/75 (36%), Positives = 42/75 (56%)
 Frame = -1

Query: 488 FRAFFKRSFDHSWFFTFHHDFVKTIFPIWFLEWWLSFGPLPIICPPEIQKAHSYYMSKSN 309
           +  F+ +S+ HSWF  F      T FP WF +WW  FG L  I PPEIQ+  ++Y SK++
Sbjct: 205 YNMFYLQSYQHSWFIQFSRS-CNTKFPAWFQKWWTFFGLLDSIFPPEIQEKFNFYKSKTS 263

Query: 308 IESFKRELFFSLNSK 264
            ++  +    +  S+
Sbjct: 264 SQNINQPRLLTFCSR 278


>ref|XP_003545434.1| PREDICTED: uncharacterized protein LOC100801756 [Glycine max]
          Length = 324

 Score = 49.7 bits (117), Expect(2) = 3e-08
 Identities = 20/54 (37%), Positives = 32/54 (59%)
 Frame = -1

Query: 464 FDHSWFFTFHHDFVKTIFPIWFLEWWLSFGPLPIICPPEIQKAHSYYMSKSNIE 303
           F HSW   F  + +   FP WFL+WW  FGP+P I P  +Q+  + +  ++N++
Sbjct: 23  FKHSWLIYFKTNTIYD-FPNWFLQWWDFFGPIPEIFPETVQQGFAQFERQNNLQ 75



 Score = 32.7 bits (73), Expect(2) = 3e-08
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -3

Query: 279 FAEFKVPWILCWSFSF-KQWKPKPFPISIVREFKVKWWQGYSEKYCNVDVIK 127
           F+ F + WI  W + + K  K   +P S+ R   VKWW  +     + + +K
Sbjct: 86  FSSFALSWIFSWQYHYSKTEKTNQYP-SLQRHAFVKWWSQFDSSKADPEQVK 136


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