BLASTX nr result

ID: Scutellaria23_contig00027378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027378
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-l...   161   5e-38
ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [R...   160   8e-38
gb|ACY64665.1| SRS2 [Arabidopsis thaliana]                            158   5e-37
ref|NP_194242.6| P-loop containing nucleoside triphosphate hydro...   158   5e-37

>ref|XP_002332333.1| predicted protein [Populus trichocarpa] gi|222832580|gb|EEE71057.1|
            predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/102 (76%), Positives = 90/102 (88%)
 Frame = +2

Query: 11   FLKRFSAESRPVVSHLFHQWAKKPAFHDPKRLLNKVAFVIDERLRVKKSTHKDVLRELKS 190
            FL+RF+ E R V+SHLFHQWAKK AF +PKRLLNKV FVIDERLRV+K+ HKDVLR LKS
Sbjct: 914  FLRRFAVEERSVISHLFHQWAKKQAFQNPKRLLNKVGFVIDERLRVEKNKHKDVLRALKS 973

Query: 191  CLTSDEAYQFAVSVLRWEQIPAEKRAHLMREKQEHFQKLRIE 316
            CL+ DEA+Q+A  VLRWEQIPA++RAHL+ EKQEHFQKLRIE
Sbjct: 974  CLSCDEAFQYAEYVLRWEQIPADQRAHLIHEKQEHFQKLRIE 1015


>ref|XP_003555493.1| PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max]
          Length = 1123

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/104 (73%), Positives = 92/104 (88%)
 Frame = +2

Query: 5    SNFLKRFSAESRPVVSHLFHQWAKKPAFHDPKRLLNKVAFVIDERLRVKKSTHKDVLREL 184
            ++FL+RFS E+R +VSHLFHQWAKK AF DPKRLL+KV+FVIDERLR K++ +KD+L  L
Sbjct: 979  NDFLRRFSVENRSIVSHLFHQWAKKKAFQDPKRLLDKVSFVIDERLRQKRNKNKDLLNTL 1038

Query: 185  KSCLTSDEAYQFAVSVLRWEQIPAEKRAHLMREKQEHFQKLRIE 316
            KSCL+ DEA+Q+A  VLRWEQIPA+KRAHLMREKQEHF KL+IE
Sbjct: 1039 KSCLSCDEAFQYAQYVLRWEQIPADKRAHLMREKQEHFLKLKIE 1082


>ref|XP_002511032.1| ATP-dependent DNA helicase pcrA, putative [Ricinus communis]
            gi|223550147|gb|EEF51634.1| ATP-dependent DNA helicase
            pcrA, putative [Ricinus communis]
          Length = 1089

 Score =  160 bits (406), Expect = 8e-38
 Identities = 75/104 (72%), Positives = 91/104 (87%)
 Frame = +2

Query: 5    SNFLKRFSAESRPVVSHLFHQWAKKPAFHDPKRLLNKVAFVIDERLRVKKSTHKDVLREL 184
            ++FLKRF+   R VVSHLFHQWAKK AF +PKRLL+KV FVIDERLR+KK+ HKDVLR L
Sbjct: 945  NSFLKRFAVVDRSVVSHLFHQWAKKQAFQNPKRLLDKVGFVIDERLRIKKNKHKDVLRAL 1004

Query: 185  KSCLTSDEAYQFAVSVLRWEQIPAEKRAHLMREKQEHFQKLRIE 316
            K+CL+ DEA+Q+A   LRWEQIPA++RAH+MREKQE+FQK+RIE
Sbjct: 1005 KACLSCDEAFQYAEYALRWEQIPADERAHMMREKQEYFQKVRIE 1048


>gb|ACY64665.1| SRS2 [Arabidopsis thaliana]
          Length = 1147

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/104 (72%), Positives = 88/104 (84%)
 Frame = +2

Query: 5    SNFLKRFSAESRPVVSHLFHQWAKKPAFHDPKRLLNKVAFVIDERLRVKKSTHKDVLREL 184
            +NFLKRF  E R VVSHLFH WAKK AF +PKRL++KV FVI ERL +KK+ HKDVLR L
Sbjct: 1003 NNFLKRFDVEVRSVVSHLFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRAL 1062

Query: 185  KSCLTSDEAYQFAVSVLRWEQIPAEKRAHLMREKQEHFQKLRIE 316
            KS LTS+EA+Q+A  VLRWEQ+PA+ RAH++REKQEHFQKLRIE
Sbjct: 1063 KSSLTSEEAFQYAEHVLRWEQLPADTRAHIVREKQEHFQKLRIE 1106


>ref|NP_194242.6| P-loop containing nucleoside triphosphate hydrolase-like protein
            [Arabidopsis thaliana] gi|332659614|gb|AEE85014.1| P-loop
            containing nucleoside triphosphate hydrolase-like protein
            [Arabidopsis thaliana]
          Length = 1149

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/104 (72%), Positives = 88/104 (84%)
 Frame = +2

Query: 5    SNFLKRFSAESRPVVSHLFHQWAKKPAFHDPKRLLNKVAFVIDERLRVKKSTHKDVLREL 184
            +NFLKRF  E R VVSHLFH WAKK AF +PKRL++KV FVI ERL +KK+ HKDVLR L
Sbjct: 1005 NNFLKRFDVEVRSVVSHLFHNWAKKQAFQEPKRLIDKVRFVIGERLAIKKNKHKDVLRAL 1064

Query: 185  KSCLTSDEAYQFAVSVLRWEQIPAEKRAHLMREKQEHFQKLRIE 316
            KS LTS+EA+Q+A  VLRWEQ+PA+ RAH++REKQEHFQKLRIE
Sbjct: 1065 KSSLTSEEAFQYAEHVLRWEQLPADTRAHIVREKQEHFQKLRIE 1108


Top