BLASTX nr result

ID: Scutellaria23_contig00027337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria23_contig00027337
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145274.1| PREDICTED: copper transporter 1-like isoform...    55   4e-12
ref|XP_004145275.1| PREDICTED: copper transporter 1-like isoform...    55   4e-12
ref|XP_003569917.1| PREDICTED: copper transporter 1-like [Brachy...    47   2e-11
ref|NP_200711.1| copper transporter 1 [Arabidopsis thaliana] gi|...    48   2e-11
emb|CAA90018.1| copper transporter protein [Arabidopsis thaliana]      48   2e-11

>ref|XP_004145274.1| PREDICTED: copper transporter 1-like isoform 1 [Cucumis sativus]
           gi|449471163|ref|XP_004153227.1| PREDICTED: copper
           transporter 1-like isoform 1 [Cucumis sativus]
           gi|449510896|ref|XP_004163804.1| PREDICTED: copper
           transporter 1-like isoform 1 [Cucumis sativus]
          Length = 159

 Score = 55.5 bits (132), Expect(2) = 4e-12
 Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +2

Query: 332 IVECLS-CYQLKKRDGFCGGGVFKTMVHGLRVGLGYVLMLAVMSFNVGVLIVAI 490
           +VE L+ C  +K+       G+ +T++H +RVGL Y++MLAVMSFNVGVL+VAI
Sbjct: 73  LVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAI 126



 Score = 41.2 bits (95), Expect(2) = 4e-12
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 226 FYWGKNSEILFSGWPGTRTGMY 291
           F+WG N+EILF  WPG R+GMY
Sbjct: 39  FFWGTNAEILFHRWPGERSGMY 60


>ref|XP_004145275.1| PREDICTED: copper transporter 1-like isoform 2 [Cucumis sativus]
           gi|449471166|ref|XP_004153228.1| PREDICTED: copper
           transporter 1-like isoform 2 [Cucumis sativus]
           gi|449510900|ref|XP_004163805.1| PREDICTED: copper
           transporter 1-like isoform 2 [Cucumis sativus]
          Length = 153

 Score = 55.5 bits (132), Expect(2) = 4e-12
 Identities = 28/54 (51%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = +2

Query: 332 IVECLS-CYQLKKRDGFCGGGVFKTMVHGLRVGLGYVLMLAVMSFNVGVLIVAI 490
           +VE L+ C  +K+       G+ +T++H +RVGL Y++MLAVMSFNVGVL+VAI
Sbjct: 73  LVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAI 126



 Score = 41.2 bits (95), Expect(2) = 4e-12
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = +1

Query: 226 FYWGKNSEILFSGWPGTRTGMY 291
           F+WG N+EILF  WPG R+GMY
Sbjct: 39  FFWGTNAEILFHRWPGERSGMY 60


>ref|XP_003569917.1| PREDICTED: copper transporter 1-like [Brachypodium distachyon]
          Length = 162

 Score = 47.4 bits (111), Expect(2) = 2e-11
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = +2

Query: 407 VHGLRVGLGYVLMLAVMSFNVGVLIVAI 490
           VH  RVGL YVLMLA+MSFNVGVL+VA+
Sbjct: 99  VHAARVGLAYVLMLALMSFNVGVLLVAV 126



 Score = 47.0 bits (110), Expect(2) = 2e-11
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +1

Query: 226 FYWGKNSEILFSGWPGTRTGMY 291
           FYWGK+SEILF GWPG R GMY
Sbjct: 40  FYWGKDSEILFDGWPGARGGMY 61


>ref|NP_200711.1| copper transporter 1 [Arabidopsis thaliana]
           gi|12230995|sp|Q39065.2|COPT1_ARATH RecName: Full=Copper
           transporter 1; Short=AtCOPT1
           gi|18496858|gb|AAL74265.1|AF466373_1 copper transporter
           COPT1 [Arabidopsis thaliana] gi|10177631|dbj|BAB10779.1|
           copper transporter-like protein [Arabidopsis thaliana]
           gi|20258855|gb|AAM13909.1| putative copper transport
           protein [Arabidopsis thaliana]
           gi|21689855|gb|AAM67571.1| putative copper transport
           protein [Arabidopsis thaliana]
           gi|110741978|dbj|BAE98928.1| copper transport protein
           [Arabidopsis thaliana] gi|332009749|gb|AED97132.1|
           copper transporter 1 [Arabidopsis thaliana]
          Length = 170

 Score = 48.1 bits (113), Expect(2) = 2e-11
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +1

Query: 226 FYWGKNSEILFSGWPGTRTGMY 291
           F+WGKN+E+LFSGWPGT +GMY
Sbjct: 46  FFWGKNTEVLFSGWPGTSSGMY 67



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = +2

Query: 389 GVFKTMVHGLRVGLGYVLMLAVMSFNVGVLIVAI 490
           G+ +T V+ LR+GL Y++MLAVMSFN GV +VA+
Sbjct: 103 GLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVAL 136


>emb|CAA90018.1| copper transporter protein [Arabidopsis thaliana]
          Length = 169

 Score = 48.1 bits (113), Expect(2) = 2e-11
 Identities = 17/22 (77%), Positives = 21/22 (95%)
 Frame = +1

Query: 226 FYWGKNSEILFSGWPGTRTGMY 291
           F+WGKN+E+LFSGWPGT +GMY
Sbjct: 45  FFWGKNTEVLFSGWPGTSSGMY 66



 Score = 45.8 bits (107), Expect(2) = 2e-11
 Identities = 20/34 (58%), Positives = 28/34 (82%)
 Frame = +2

Query: 389 GVFKTMVHGLRVGLGYVLMLAVMSFNVGVLIVAI 490
           G+ +T V+ LR+GL Y++MLAVMSFN GV +VA+
Sbjct: 102 GLIQTAVYTLRIGLAYLVMLAVMSFNAGVFLVAL 135


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